Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq438 163 6e-35 seq1523 134 3e-26 >seq438 Length=237658 Score = 163 bits (180), Expect = 6e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || || ||||| || ||||| |||| ||||| | || |||||||| ||| Sbjct 145038 TGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCTTCGAGTTGC 145097 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| || || ||||||||||| || || ||||| ||||||||||| ||| Sbjct 145098 TTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAATCTTT 145157 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| || ||||| || || ||| ||||| ||||| | |||||||| ||| Sbjct 145158 GACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGTCTTTCCGGTC 145217 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | |||||| Sbjct 145218 AGGGTCTTGACGAAGATTTGCAT 145240 Score = 152 bits (168), Expect = 1e-31 Identities = 150/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| |||||||| ||||| |||| || |||| |||||||| || || Sbjct 145265 GTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTTCGGCCATCTTCAAGTTG 145324 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||||||||| |||||||| ||||||||||| ||||| ||||||||||| || Sbjct 145325 CTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATCTT 145384 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || || || || || ||||| || || | ||||| || || Sbjct 145385 GCTCTTGACGTTGTCGATCGTATCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCGGT 145444 Query 195117 CAAAGTTTTTACGA 195130 | || || |||| Sbjct 145445 GAGGGTCTTGACGA 145458 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| ||||| || || || ||||| ||| | || | ||||| || | |||| Sbjct 144810 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAATGTACGACCATCCTCCAACTGC 144869 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| |||||||| | || || |||||||| || || || || || |||||||| ||| Sbjct 144870 TTACCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTATCTTGAATCTTT 144929 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| |||||||||||||| ||||| || | || | ||||| || ||| Sbjct 144930 GACTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCCAATGTGATTGTCTTGCCAGTC 144989 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 ||||| || || || | |||||| Sbjct 144990 AAAGTCTTGACAAAGATTTGCAT 145012 Score = 127 bits (140), Expect = 5e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || |||||||||||||| || || || |||||||| | ||| || | || || ||| Sbjct 145541 ACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCCTCG 145600 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || ||||| ||||| ||||||||||| ||||| || Sbjct 145601 AGCTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATGCCTTCCTTGTCCTGG 145660 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || ||||| || || || || || ||||| | ||||| Sbjct 145661 ATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTG 145720 Query 195112 CCTGT 195116 || || Sbjct 145721 CCGGT 145725 >seq1523 Length=724860 Score = 134 bits (148), Expect = 3e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || |||||||||||||| ||||| || |||||||||| || |||| || |||||| Sbjct 230141 ACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAGAGGGTTCGGCCGTCTTCG 230082 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| || ||||| ||||| || || || || || ||||| || Sbjct 230081 AGTTGCTTGCCAGCGAAGATCAGGCGTTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGG 230022 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || ||||| || || ||||| || ||||| | ||||| Sbjct 230021 ATCTTGGACTTGACATTGTCGATGGTATCAGACGACTCCACCTCGAGGGTGATAGTCTTG 229962 Query 195112 CCTGTCAAAGTTTTTACGA 195130 || || | || || |||| Sbjct 229961 CCCGTGAGGGTCTTCACGA 229943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109452444557117