Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq438 91.5 1e-12 seq1370 87.8 1e-11 >seq438 Length=237658 Score = 91.5 bits (100), Expect = 1e-12 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||||||| || | || ||||| ||| |||| ||| ||||| || | || ||| Sbjct 145250 GAGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTG--AATGTTGTAGTCGGAGAGGGTT 145307 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||||||||| ||||| || || ||||| | ||| ||||| |||||||| ||| Sbjct 145308 CGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCT 145367 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || || |||||||| || || || || || ||||| | | || | | |||||| Sbjct 145368 TCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATCGTATCGGAG-GACTCGACTTCGAG 145426 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| | || || || || || || || |||| Sbjct 145427 AGTGATGGTCTTGCCGGTGAGGGTCTTGACGA 145458 >seq1370 Length=616207 Score = 87.8 bits (96), Expect = 1e-11 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || |||||||| || | || |||||||||||||| || || |||||||| ||| Sbjct 107805 ACAGTCCCAGCATACTTCACCGATTCACAACGTCAAGCCACCAAGGATGCTGGTTTGATT 107864 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || || ||||| ||||| ||||| || || || || || || |||| || || Sbjct 107865 GCTGGTCTCAACGTTCTCCGTATCATCAACGAGCCCACCGCCGCCGCTATTGCTTACGGT 107924 Query 550529 CTTGATAA 550536 || || || Sbjct 107925 CTCGACAA 107932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029187533869990