Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq772 93.3 5e-14 >seq772 Length=71917 Score = 93.3 bits (102), Expect = 5e-14 Identities = 167/244 (68%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 |||||||| |||||||||| || ||| || || | || ||| ||||||||||| | Sbjct 53919 CCATGATAGACTGCATAGAAAGCACTCATGTTGGCTAACAATGCCTGTGCTGTGCATACA 53860 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 ||||| || || || || | | ||||||||||||| ||| || ||||| ||||| | Sbjct 53859 TTACTTGTCGCCTTTTCACGACGGATATGCTGCTCTCGAGTCTGGAGTGCCAATCTCATT 53800 Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451 || | || |||||| || |||| | | |||||| || |||| ||| Sbjct 53799 GCTTTGTCCCCCAATCTGTCCTTCGATACTCCTATCAAGCGGCCAGGAATTTTTCGCTTG 53740 Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511 |||| || || || ||||| || |||||||| || ||| | || | || | ||| Sbjct 53739 TACTGATCGCTTACAGCGAAGAAGGCGGCATGAGGTCCACCGAAGCCAAATGGCACTCCA 53680 Query 139512 AACC 139515 |||| Sbjct 53679 AACC 53676 Score = 89.7 bits (98), Expect = 6e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||||| || ||||| || || ||||||||||| || || ||||||||||| |||||||| Sbjct 55083 ACACCGATTGGACCAACACCTGGACCTCCACCGCCGTGAGGAATACAGAAAGTCTTATGC 55024 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || | ||||| |||||||| || || | || || ||| | ||||||| Sbjct 55023 AGGTTCAAGTGACAGACATCTGCTCCGATCTCTCCAGGAGAGCATAAACCAATCTGTGCA 54964 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAAC 138349 || | || ||||| || | || ||||| || |||| | |||||| Sbjct 54963 TTCATGTTGGCACCGTCCATGTAAACCTGCCCGCCATGCTGATGAAC 54917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578983555928520