Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq476 141 1e-27 seq315 131 2e-24 seq502 113 6e-19 >seq476 Length=728557 Score = 141 bits (156), Expect = 1e-27 Identities = 174/236 (74%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||||| |||||| |||||| |||||||||||||| | |||||||| Sbjct 288733 GCCTTTTGGTAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGCGAGATG 288674 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||| | ||| ||||||| | ||||||| ||| ||| || || | | Sbjct 288673 TTTTCCATGAAGTCGAATGGGTTGGCGGACTTGTAGACCTTCTCGTTGCCAAGAGCAAGG 288614 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC--GA 868868 ||||| ||||| |||||||||||||||||||| ||||||| || ||||||||| || Sbjct 288613 AGCAGACGGTCAGCGACAAACTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCGAGA 288554 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924 |||||| | || || | ||| ||| ||||| | |||||||| || |||||| Sbjct 288553 AGAGCGCAA--GGAAGAGCCTCAGTCAAGAACTCCTGTTCGATCTCAACAGCCTCG 288500 >seq315 Length=996457 Score = 131 bits (144), Expect = 2e-24 Identities = 92/105 (88%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 ||||||||||||| |||||||| || ||||| |||| |||||| | || |||||||||| Sbjct 272434 CCAACTACCTCGATATCAAGCCCCTCCTCGACGTTGGCTGCAAGACCGTCGCCAACATGA 272375 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||| ||||| |||||||||||||||||||| || ||||||| Sbjct 272374 TCAAGGGAAAGTCCCCCGAGGAGATCCGCAAGACATTCAACATCA 272330 >seq502 Length=98925 Score = 113 bits (124), Expect = 6e-19 Identities = 207/301 (69%), Gaps = 2/301 (1%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| |||||||| | || |||| ||| || || || |||||||| |||| ||| || || Sbjct 22476 CTGATCGACGTATCTGGCGGTGTTGTTGAAAACACGAAGCATGGGGACGATGCCATTTGA 22417 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | |||||| || || || | ||| || |||| ||||| | ||| | || ||| Sbjct 22416 GTTGCCGTTTGTTCCAGCAATGTAAGCACCGGTCGCGCGGATTCGGTGGACATTAAGGCC 22357 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCT 1630243 || || || || |||||| || | || || ||| || | ||||||||||| || | Sbjct 22356 AATTCCACCAGCATTCTTGGAAATCATAGCACA-TGTCTTCAATGTGTCGTAGATACCGT 22298 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 |||| ||||| |||||||||| | || ||||| || ||| ||| | || | |||| Sbjct 22297 CGATGGAGTCCTCCTTCATGTCAATCAGGAAGCAGGAAGAGAGTTGTGCTTGTGGTGTGC 22238 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363 | || |||||| || || | || ||||| ||| | | ||||| || ||||| Sbjct 22237 CAGCAGCGAAGAGGGTCGGGGAAGCATGTGTGAAGCACTTCTGGGACATCAGGTTGTAGG 22178 Query 1630364 T 1630364 | Sbjct 22177 T 22177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106970885335167