Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq438 122 6e-23 seq491 113 3e-20 seq1523 105 4e-18 >seq438 Length=237658 Score = 122 bits (134), Expect = 6e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | |||| |||||| |||||||| ||||| || ||| | || |||| Sbjct 145257 AGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTTCGGCCATCT 145316 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||| |||||||| || ||||| || ||| | || | || |||||||| Sbjct 145317 TCAAGTTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTGTCT 145376 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || || |||||| || | || |||||| Sbjct 145377 TGAATCTTGCTCTTGACGTTGTCGATCGTATCGGAGGACTCGACTTCGAGAGTGATGGTC 145436 Query 34946 TTTCCCGTGAGGGTCTTTAC 34965 || || ||||||||||| || Sbjct 145437 TTGCCGGTGAGGGTCTTGAC 145456 Score = 107 bits (118), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| ||||| || || |||| | || || |||||||| ||||||||| Sbjct 145050 TCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAG 145109 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || || || |||||| | || | || |||||||| | || ||| ||||| Sbjct 145110 ATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGAC---- 145165 Query 34907 GCTATCGAT-TCATTGGCC---TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 | ||||||| || || | ||||| || | ||| || |||||||| || |||||||| Sbjct 145166 GTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGTCTTTCCGGTCAGGGTCTT 145225 Query 34963 TACAAAGATCTGCAT 34977 || ||||| ||||| Sbjct 145226 GACGAAGATTTGCAT 145240 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| ||| ||||||||| ||||| || ||||| ||| |||| | || Sbjct 145538 AGGACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCC 145597 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||||| || || || ||| | || | || |||||||| Sbjct 145598 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATGCCTTCCTTGTCC 145657 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| || ||| || || | ||| || Sbjct 145658 TGGATCTTGGACTTGAC--AT--TGTCGATGGTATCAGAGGACTCAACCTCGAGGGTGAT 145713 Query 34942 GGTCTTTCCCGTGA 34955 |||||| || |||| Sbjct 145714 GGTCTTGCCGGTGA 145727 >seq491 Length=357818 Score = 113 bits (124), Expect = 3e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| | || | || || ||||||||||| || |||| Sbjct 80210 CCTTCTGGATGTTGTAGTCTGAAAGGGTACGGCCGTCCTCGAGTTGCTTTCCAGCAAAGA 80269 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| |||||||| | || | ||||||||||| | || || ||||| Sbjct 80270 TCAATCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 80329 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || || ||| || |||| ||| || ||||||||||| || |||||||||| Sbjct 80330 CGATCGTATCGGAGGACTCCACCTCAAGGGTGATAGTCTTTCCCGTAAGAGTCTTTACAA 80389 Query 34968 AG 34969 || Sbjct 80390 AG 80391 >seq1523 Length=724860 Score = 105 bits (116), Expect = 4e-18 Identities = 147/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| ||| |||||| || ||||| || || || ||| | || | || Sbjct 230144 AGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAGAGGGTTCGGCCGTCT 230085 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || ||||||||||| ||||||||||| | || | ||||||||||| Sbjct 230084 TCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 230025 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| | ||| || || | ||| || Sbjct 230024 TGGATCTTGGACTTGAC--AT--TGTCGATGGTATCAGACGACTCCACCTCGAGGGTGAT 229969 Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||| |||||||||||||| || Sbjct 229968 AGTCTTGCCCGTGAGGGTCTTCAC 229945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325684658799569