Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq438 104 2e-17 >seq438 Length=237658 Score = 104 bits (114), Expect = 2e-17 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629 ||| ||||||||||| || || || || || || ||||| || || | |||| || ||| Sbjct 144797 ACGGAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAT-GTACGAC 144855 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 ||| || | || || ||||| | |||||||| ||||| || || || |||||||| | Sbjct 144856 CATCCTCCAACTGCTTACCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCCT 144915 Query 29690 TGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 | ||||| ||| |||| ||||| | || | ||||| || || || || | || Sbjct 144916 TATCTTG-AATCTTTGACTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCCAATGTG 144974 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||||||| || || || ||||| || ||||| Sbjct 144975 ATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 145012 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||||||||||||| ||||| ||||| ||||| || || | | ||||| Sbjct 145025 ACGAAGAACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCC 145084 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || |||||||| ||||| || | || | | || || || || || ||||| || || Sbjct 145085 GTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTT 145144 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| |||| ||||| | || | || || || ||| ||||| || || | Sbjct 145145 GTCTTG-AATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGA 145203 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || || | ||| || || || || ||||| Sbjct 145204 TAGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || ||||| || ||||||||||| || || | | ||| || Sbjct 145253 ACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTTCGGCC 145312 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| || ||||| | || | | ||| ||||| || |||||||| || || Sbjct 145313 ATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCTTCCTT 145372 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | ||||| | || | || || || || ||||| ||||| | Sbjct 145373 GTCTTG-AATCTTGCTCTTGACGTTGTCGATCGTATCGGAGGACTCGACTTCGAGAGTGA 145431 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAAC 29774 | || ||||| || | ||| || || Sbjct 145432 TGGTCTTGCCGGTGAGGGTCTTGAC 145456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385209570844191