Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1370 102 6e-16 seq379 93.3 3e-13 >seq1370 Length=616207 Score = 102 bits (112), Expect = 6e-16 Identities = 187/274 (68%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || || ||||| ||||| ||||| | |||| || | |||| | || | ||| | Sbjct 108076 TTGTCGAAATCCTCACCACCCAAGTGGGTATCACCGGCGGTAGACTTAACCTCGAAGATA 108017 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || || |||| | |||||| | ||||| |||||| ||||| | ||| || || || Sbjct 108016 CCCTCCTCAATGGTCAAAAGGGAGACATCGAAGGTTCCTCCACCAAGATCGAAGATGAGA 107957 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 || || || || || || || ||||| || |||| ||| || || || || Sbjct 107956 ACGTTGCGCTCGCCCTCAACCTTCTTGTCGAGACCGTAAGCAATAGCGGCGGCGGTGGGC 107897 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 || || || || | | ||| || ||||||||||| || ||||| || |||||||| Sbjct 107896 TCGTTGATGATACGGAGAACGTTGAGACCAGCAATCAAACCAGCATCCTTGGTGGCTTGA 107837 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 | |||||||||| | || ||||| || || |||| Sbjct 107836 CGTTGTGAATCGGTGAAGTATGCTGGGACTGTAA 107803 Score = 100 bits (110), Expect = 2e-15 Identities = 254/384 (66%), Gaps = 3/384 (1%) Strand=Plus/Minus Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484 ||||| || || | || || |||||||| | ||| || ||||| || ||||| ||||| Sbjct 108918 GGCAGAAACGTTCATGATTCCGTTGGCATCAAGATCGAAGGTGACCTCGATTTGTGGGAC 108859 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 || | | ||||||||||| || | | || | |||| | || || || || Sbjct 108858 ACCACGAGGTGCAGGTGGGATACCAGTGAGCTCGAACTTGCCCAAAAGGTTGTTGTCCTT 108799 Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604 ||| || || ||||||||||| | ||||||| || ||| |||||| || || | Sbjct 108798 GGTGCGTTGACGCTCACCCTCGAAGACTTGGATAAGCACACCAGGTTGATTGTCGGAGAA 108739 Query 281605 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 || | || || ||| || || || || || ||||| | ||| | ||||| Sbjct 108738 GGTGGAGAAGACCTCGGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGAATGAGCTTGGT 108679 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||| |||||||| || || | ||||||||| | || | ||||| | |||| || Sbjct 108678 CATTTGTCCACCAGCAGTCTCGATACCAAGAGACAATGGCGCAACATCGAGAAGGAGGAT 108619 Query 281725 AT--TTTGAAGTTTTTCAT-CAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 | || | | || || ||| | |||| ||||| || || || | |||||||| Sbjct 108618 TTCGTTGGTGGACTTGGATGAAGTGTCACCAGAGAGAATGGCAGCCTGGACGGCAGCACC 108559 Query 281782 ATATGCAACAGCTTCATCAGGATT 281805 || || ||||| |||||||| || Sbjct 108558 GTAGGCGACAGCCTCATCAGGGTT 108535 >seq379 Length=847565 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 || || |||||||| | ||||| |||||||||||| ||||| |||| ||| | || ||| Sbjct 466023 GAGTTCTTCTTCCACGCCATGGCAGGTCGTGAAGGTCTTATTGATACCGCTGTCAAGACT 465964 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 ||||| || ||||| |||||| | || |||||| ||||| ||| ||| || Sbjct 465963 GCTGAAACCGGTTACATTCAACGTCGTCTAGTCAAGGCTCTTGAGGATGTTATGGCGAAA 465904 Query 435253 TATGATGGTACAGTGAGAAAT 435273 || || || ||||| |||||| Sbjct 465903 TACGACGGAACAGTCAGAAAT 465883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740529704567526