Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq438 105 6e-18 seq491 86.0 6e-12 >seq438 Length=237658 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || || || || || || ||||| ||| || ||| ||| ||||| Sbjct 145035 AAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCTTCGAGT 145094 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | ||||| ||||| ||||| || ||||| ||||||||||| ||| Sbjct 145095 TGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAATC 145154 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||||| | || | || |||| | || || |||| ||||| || || ||| Sbjct 145155 TTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGTCTTTCCG 145214 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| || ||||| Sbjct 145215 GTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 100 bits (110), Expect = 3e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || |||||||| | ||| ||| ||||||||||||||| || Sbjct 145553 GTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACC-GTCCTCGAGCTGCTTTCC 145611 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||| || || || || |||||||||||||| |||||| ||| Sbjct 145612 GGCGAAGATCAAACGCTGTTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTT 145671 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | || || | || ||| || |||| ||||| ||| |||||||| Sbjct 145672 GACATTGTCGATGGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 145725 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| || || || ||||| ||| | || | | | || || || Sbjct 145263 AAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTTCGGCCA-TCTTCAAG 145321 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || ||| | || || || || || || ||||| || ||||||||||| || Sbjct 145322 TTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAAT 145381 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | ||| |||| || ||| || |||| |||| ||| ||||| Sbjct 145382 CTTGCTCTTGACGTTGTCGATCGTATCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCC 145441 Query 133634 GGTCAGAGTTTTTACGA 133650 ||| || || || |||| Sbjct 145442 GGTGAGGGTCTTGACGA 145458 >seq491 Length=357818 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||||||||| ||||| || || | || | ||||||||||| || || || || ||||| Sbjct 80244 GTCCTCGAGTTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCCGGGGGAATTCCCTCCTT 80303 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | ||| |||| || |||||| || | ||||| Sbjct 80304 GTCCTGGATCTTGGACTTGACATTGTCGATCGTATCGGAGGACTCCACCTCAAGGGTGAT 80363 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAA 133651 || || || || ||||| ||||| || Sbjct 80364 AGTCTTTCCCGTAAGAGTCTTTACAAA 80390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483408406299240