Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq438 104 6e-17 seq1523 84.2 5e-11 >seq438 Length=237658 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || || || || ||||| ||||| ||||| || ||| Sbjct 145009 CAAATCTTTGTCAAGACTTTGACTGGCAAGACAATCACATTGGAGGTGGAGTCGTCGGAC 144950 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||||||| || || || || || ||| || Sbjct 144949 ACCATTGACAACGTCAAGTCAAAGATTCAAGATAAGGAGGGTATCCCACCAGACCAGCAG 144890 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | |||||||| || ||||||||||| ||||| | || ||| ||| |||||| || Sbjct 144889 AGATTGATCTTCGCTGGTAAGCAGTTGGAGGATGGTCGTACATTGAGCGACTACAACATC 144830 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 ||||| ||||||||||| || Sbjct 144829 CAGAAGGAGTCTACTCTCCA 144810 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || ||||| || ||||| | ||||| ||| || || || |||| Sbjct 145226 CAAGACCCTGACCGGAAAGACTATCACCCTCGAAGTCGAATCGTCCGATACCATCGATAA 145167 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||||||| || ||||| || || ||| || | || ||||| Sbjct 145166 CGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAGCGCCTCATCTT 145107 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| ||||| | ||||| || | ||| || |||| |||||| |||| || || || Sbjct 145106 CGCCGGCAAGCAACTCGAAGACGGCCGCACTCTGTCCGACTACAACATCCAAAAGGAATC 145047 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| ||||| | ||| | | ||||| Sbjct 145046 TACGCTTCATTTGGTTCTTCGTCTTCG 145020 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || |||||| | ||||| || || || || |||| Sbjct 145454 CAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGAGTCCTCCGATACGATCGACAA 145395 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| || ||||| ||| || || ||| | |||||||| Sbjct 145394 CGTCAAGAGCAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAACGTCTTATCTT 145335 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| |||||||| | |||||||| | || | |||| |||||| | || || ||||| Sbjct 145334 CGCTGGAAAGCAACTTGAAGATGGCCGAACCCTCTCCGACTACAACATTCAAAAGGAGTC 145275 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 145274 CACCCTCCAC 145265 >seq1523 Length=724860 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| | || ||||| ||||| || |||| Sbjct 229948 AAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCTGATACCATCGACAAT 230007 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || ||||| |||||| ||| | || |||||| Sbjct 230008 GTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAACGCCTGATCTTC 230067 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | ||||| || | || | ||||||||||| |||| || ||||| Sbjct 230068 GCTGGCAAGCAACTCGAAGACGGCCGAACCCTCTCCGATTACAACATCCAAAAGGAGTCC 230127 Query 206365 ACTCTTCACCTTGT 206378 |||||||| || || Sbjct 230128 ACTCTTCATCTCGT 230141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181789743595971