Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq476 123 4e-22 seq502 96.9 5e-14 >seq476 Length=728557 Score = 123 bits (136), Expect = 4e-22 Identities = 234/339 (69%), Gaps = 13/339 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| ||||| || || |||||||| || ||| | || | Sbjct 287834 GATCTGGCAGATGTAC-AAGAAGGCTGAGGCATCTTTCTGGACCGCAGAAGAGATTGATC 287892 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGG-TGTCG--CTGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| | | || | ||| ||||||||| |||| Sbjct 287893 TTTCCAAGGATCTTCACG----ACTGGAATAACAAACTCAACGATGACGAGCGCTATTTT 287948 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || ||||||||||| ||| |||||||| || || ||||| ||||||||| | Sbjct 287949 ATTTCCCACGTCCTCGC-TTTCTTCGCCGCATCTGACGGAATCGTCAACGAGAACCTTGT 288007 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | ||||| | |||||||| | || ||||| || | || ||||| ||||| || Sbjct 288008 TGAGCGCTTCAGTGGTGAGGTCCAGATTCCTGAGGCTCGCTGCTTCTACGGTTTCCAAAT 288067 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || || ||||| ||||| |||||||| || ||||||| Sbjct 288068 CATGATGGAGAACATCCACTCCGAGACATACTCTCTCCTCATCGACACATATATCAAGGA 288127 Query 1456068 CCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACAC 1456106 | || ||||| |||| || ||| || ||||| Sbjct 288128 GCAGGCTCAGAAGACTTACCTTTTCAACGCTATTGACAC 288166 Score = 123 bits (136), Expect = 4e-22 Identities = 180/247 (73%), Gaps = 8/247 (3%) Strand=Plus/Plus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATC-- 1456588 |||||| || |||||||| | ||||| | | ||| | || || | |||||| || Sbjct 288500 CGAGGCTGTTGAGATCGAACAGGAGTTCTTGACTGAGGCTCTTCC--TTGCGCTCTTCTC 288557 Query 1456589 GGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCG 1456648 ||||||||| ||||| |||||| |||||||| || ||| ||||| ||||| |||||| Sbjct 288558 GGCATGAACTCCACC-CTCATGAAGCAGTACATCGAGTTT-GTCGCTGACCGTCTGCTCC 288615 Query 1456649 CGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTG 1456708 || || ||| || ||||| |||| | | |||||||| ||| | ||||| Sbjct 288616 TTGCTCTTGGCAACG-AGAAGGTCTACAAGTCCGCCAACCCATTCGACTTCATGGAAAAC 288674 Query 1456709 ATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCCAAGGCC 1456767 |||||||| | |||||||||||||| |||||| |||| |||||| ||| ||||| Sbjct 288675 ATCTCGCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTACCAAAAGGCT 288734 Query 1456768 GGCGTCA 1456774 || |||| Sbjct 288735 GGTGTCA 288741 >seq502 Length=98925 Score = 96.9 bits (106), Expect = 5e-14 Identities = 194/288 (67%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954 ||||| ||| ||| ||||| || | || || ||||| ||| ||||| || | Sbjct 22189 ATGTCCCAGAAGTGCTTCACACATGCTTCCCCGACCCTCTTCGCTGCTGGCACACCACAA 22248 Query 259955 CCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTAT 260014 | || || || ||||| ||| | |||||||||| || || ||||| || ||||| Sbjct 22249 GCACAACTCTCTTCCTGCTTCCTGATTGACATGAAGGAGGACTCCATCGACGGTATCTAC 22308 Query 260015 GACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA 260074 ||||| | ||| || || | || |||||| || || || || || || | Sbjct 22309 GACACATTGAAGACATGTGCTATGATTTCCAAGAATGCTGGTGGAATTGGCCTTAATGTC 22368 Query 260075 CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTT 260134 ||| | ||||| | || || ||| | || || || |||||| | || || ||| | Sbjct 22369 CACCGAATCCGCGCGACCGGTGCTTACATTGCTGGAACAAACGGCAACTCAAATGGCATC 22428 Query 260135 GTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || ||||||||||| ||||| ||| |||| || | |||||||| ||| Sbjct 22429 GTCCCCATGCTTCGTGTTTTCAACAACACCGCCAGATACGTCGATCAG 22476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177613377280262