Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1517 113 4e-20 >seq1517 Length=170057 Score = 113 bits (124), Expect = 4e-20 Identities = 358/553 (65%), Gaps = 8/553 (1%) Strand=Plus/Minus Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301 |||||| || || || ||||||| | || ||||| ||||| || | || || | Sbjct 67041 AATTGGCGGGTTAGATACAGAGTTTGGCGCCATTTTTCGAAGAGCTTTCGCTTCTCGAAT 66982 Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTA 19361 ||| || ||| | | || | | || || | | || ||| || |||| |||| Sbjct 66981 TTTCCCTCCAGGTTTAATAGAGAAGTTAGGTATTCAGCACGTTAAAGGTATTTTACTTTT 66922 Query 19362 TGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACAAA 19421 ||| || || || |||||| || | |||||| | || || | || | | | Sbjct 66921 TGGACCTCCTGGAACTGGAAAGACGCTTATTGCGCGTCAAATTGGAAAGATGTTGAACTC 66862 Query 19422 ACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGA 19481 | ||| ||||||||| | || ||||||||||| | || |||| ||| || || ||||| Sbjct 66861 TCGACCACCCAAAATTATCAACGGTCCTGAAATACTCAACAAATTTGTCGGACAGTCGGA 66802 Query 19482 AGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CA 19540 ||| || | ||| | || |||| || ||| ||| | | || | | |||| Sbjct 66801 AGAGAACATCCGAAAGCTCTTCTCTGATGCAGAA-AAGGAGTACAAGGAGAAAGGCGATG 66743 Query 19541 AAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT- 19599 | ||| | | || || || || | || || ||||| ||| | ||||||||||||||| Sbjct 66742 AGAGTGGTCTTCATATCATTATTTTCGACGAGTTGGATGCAGTGTGTAAGCAAAGAGGTA 66683 Query 19600 -----TCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAG 19654 ||||| | ||| || |||| ||| ||||||||| | || || ||| | | Sbjct 66682 GCGGGAGTGGTGGTACTGGCGTCGGAGACAGTGTGGTCAATCAATTGCTTTCGAAACTCG 66623 Query 19655 ACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAA 19714 ||||||| | ||||| || ||| | | | ||||| ||||||||| | | || | | Sbjct 66622 ACGGTGTCGAACAACTCAACAATGTCCTTCTAATTGGAATGACTAATCGTTTAGATATGA 66563 Query 19715 TAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCG 19774 | ||| ||| | ||||| || || || || ||| | | || || || || || | Sbjct 66562 TCGACGACGCGCTTTTACGTCCTGGCCGTTTAGAAGTCCACATGGAGATCTCATTGCCAG 66503 Query 19775 ATGAATGTGGACG 19787 ||||| | || || Sbjct 66502 ATGAAAGCGGCCG 66490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397446064966255