Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq438 113 4e-20 >seq438 Length=237658 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | |||||| || ||||| || ||||||||| || |||| |||||||| Sbjct 145032 ACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCTTCG 145091 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || || |||||| | ||||| |||||||| || || || | ||| || || || Sbjct 145092 AGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGA 145151 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | | || | || || | | ||| ||||| || || |||| || Sbjct 145152 ATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGTCTTT 145211 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || || || |||||||||||| Sbjct 145212 CCGGTCAGGGTCTTGACGAAGATTTGCATA 145241 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | ||||| || || || || ||||||||||||| | || | || || Sbjct 144804 ACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAATGTACGACCATCCTCC 144863 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||| ||||| ||| | || | | ||| || || || || | |||||| ||||| Sbjct 144864 AACTGCTTACCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTATCTTGA 144923 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | | || | ||||| | | || || || | || || | ||| Sbjct 144924 ATCTTTGACTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCCAATGTGATTGTCTTG 144983 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| || ||||||||||||||| Sbjct 144984 CCAGTCAAAGTCTTGACAAAGATTTGCATA 145013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424923778100712