Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq502 309 4e-79 seq476 120 4e-22 seq620 96.9 4e-15 >seq502 Length=98925 Score = 309 bits (342), Expect = 4e-79 Identities = 1176/1811 (65%), Gaps = 45/1811 (2%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGA 110421 ||||| |||||||| || ||||| || || |||||| || | || | |||||| | Sbjct 23834 CGGAGGTAGTACATGCCAGTCTTCAGGCCCAATTTCCA-GCCTGCAAAGTGCATACTGGT 23776 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATG-A 110480 || ||| ||| || ||| | |||| || |||||| ||| ||| || ||| | Sbjct 23775 GATCTTACCCATGGTCGGATCCTTCATGTGGATGTTCATCGATTGTGATTGATCGATGTA 23716 Query 110481 AGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCCCAAACTG 110537 ||| || | || ||| ||||| | | || | ||| | | | || ||||| || | Sbjct 23715 AGCACCACGGTC-TGCGGCCATCTGGACGA--TGGTTCGT-TGAGAGATCTCCCAGACAG 23660 Query 110538 TGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCG 110597 | |||||| ||||| ||| ||||||||| || ||| ||||| || ||||| || Sbjct 23659 TCTTGTAGAGAGCTTTGATGTCAGCTGGGATATTTGGGATGTTCTGAATTGAACCACCA- 23601 Query 110598 CCTTCACC-ATGAGA---TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCA 110653 ||| | |||| | | |||||| | | |||||||| || || | || || Sbjct 23600 ---TCAGCGATGATACGGTTCTTCATGTTGTCAGACCAGAGGCCCATGTCGACAAGATCC 23544 Query 110654 TTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATG 110713 |||| || |||||||| |||||| || || || | | ||||||| Sbjct 23543 TTGAGCAGCCATGGGTTGACAACTTGAAACTCGCCAGCAAGAACACGACGAGAGTAGATG 23484 Query 110714 TTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATT-TGTGCGGTGGAGGCTGT 110772 || | |||||||| |||||||| || || | |||||| | || || ||||| || Sbjct 23483 TTGGACGTGTATGGCTCAAAGCACTCGTTGA-AGCCAAGAATCTGACTCGTTGAGGCGGT 23425 Query 110773 TGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAG 110832 ||||||||| || | || |||||||| || ||||| | | |||||| | ||||| | Sbjct 23424 TGGCATTGGAGCAACCAGCAGACTGTTCCGTAGACCGTGTTGCTTGATTTGATCCTTCAC 23365 Query 110833 AACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACTGAAGCACC 110890 | |||||||| || || | | || | || |||||||||| | |||||| | Sbjct 23364 CTCGTCCCAGTCCCAGA-GACCGGTAGGAGTGACAC-CCCACATGTCGTATTGAAGCTCG 23307 Query 110891 CCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGG-GCTTCAGCCAATTC 110949 |||| ||| || || ||||| ||| | || ||||| | || || |||| || | || Sbjct 23306 CCTTTGGAGGCCGGTGAACCTTCATAAGTCTCATATGTGCCATGAAGCTTG-GCGAGCTC 23248 Query 110950 ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTT 111009 | | || | ||||| || ||||| || ||||| || || | | ||| Sbjct 23247 AACTGAGGAGGTGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTAAGATGCTT 23188 Query 111010 GGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAAC 111069 ||||||| || || || | |||| | || ||||| || ||||||||||| Sbjct 23187 GGCTTCAGGAGAGTCGAAAGGAAGGCGGAGGGCCAAGAAAACATCAGCAAGACCTTGAAC 23128 Query 111070 ACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAA 111128 || | | | || || | || || | ||| ||| || ||| || || || Sbjct 23127 GCCAACAGCGATGGGGCGATGACGGAAATTGCTCTTCTTGGCC-TCTGGGACAGGGTAGT 23069 Query 111129 AATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT-GATTTCATGAAGT 111187 | || |||| |||| ||||| || ||| |||| ||| | || || ||||| Sbjct 23068 AGTTGATGTCGATGATCTTGTTTAAGTTCTTGACCACAA-CTTGGCAGACATCGTGAAGC 23010 Query 111188 TTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCC 111247 || | | || | |||| | | | | |||||| | || ||||| | || ||| Sbjct 23009 TTCTTGAAGTCGTATGTGCCATTGGCCATGTCGACATATGTGGGGAGGGCTAGGGAAGCC 22950 Query 111248 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTG 111307 || ||||| || || |||||| | | ||||| | || || ||||| | |||| Sbjct 22949 AAGTTGCAGACTGCAACCTCATCTGGAGCACAATACTCGACGATCTCGGTACAGAGGTTG 22890 Query 111308 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAG 111367 || || ||| || |||| ||||| ||||| || || ||||||| ||||||||||| Sbjct 22889 GAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTTTTTCTGTTGCAAGCATCCTTGTAC 22830 Query 111368 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGC 111426 | |||| | || | || ||||| ||||||| | ||||| | | ||| | | || | Sbjct 22829 AACATGAAAGGGTTTCCGGTCTCAGTCTGTGCCTCCAGAATGGAATACCAGAGCTTCTGA 22770 Query 111427 GGCTGGTACAATGGCGTTGG--CCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGCTTC 111483 | || | |||| ||| ||| | ||| | | ||||||||| ||| || || || Sbjct 22769 GCCTTG----ATGGTTTTGCGACCCTTTCCTTCACGCTCGTACTTCTCGTAAAGAGCCTC 22714 Query 111484 AAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCA 111543 || || || || | || | || ||||| || || ||||| | |||| ||| Sbjct 22713 GAATTCATCGCCGTAGACATCAGCTAGGCCTGGGCACTCGTTGGGACACATCAGAGTCCA 22654 Query 111544 TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 111603 || ||| | |||||| ||||||||||| || || |||||||||| || | ||||| Sbjct 22653 TTCTCCATTCTTCTCAACACGCTTCATGAACAGATCAGGAATCCACAAGGCGTAGAAGAG 22594 Query 111604 ATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGA 111662 ||| | | ||| || | ||||| | || || || ||| | ||||||||||| | | Sbjct 22593 ATCACGAGCACGGA-CTTCTTCCTTGCCGTGATTCTTTCGGAGGTCAAGGAACTCAAACA 22535 Query 111663 TATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTC---GACGCCCAGCTT 111719 ||| |||||||||||||| || |||| |||| || ||| || ||| | | Sbjct 22534 CATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCCGGTCTCTTGTTTCCACCCT 22475 Query 111720 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 111779 ||| || || | || ||| ||| || || |||||||| || | || |||| ||| | Sbjct 22474 GATCGACGTATCTGGCGGTGTTGTTGAAAACACGAAGCATGGGGACGATGCCATTTGAGT 22415 Query 111780 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 111839 || ||||| || ||| || | || | | |||| | | |||| Sbjct 22414 TGCCGTTTGTTCCAGCAATGTAAGCACCGGTCGCGCGGATTCGGTGGACATTAAGGCCAA 22355 Query 111840 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 111899 | || ||||| ||| || || ||||| | | | || | |||||||||| || Sbjct 22354 TTCCACCAGCATTCTTGGAAATCATAGCACATGTCTTCAATGTGTCGTAGATACCGTCGA 22295 Query 111900 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAG 111959 | ||||||||||| || | || |||||||| || | || | | |||||| |||| Sbjct 22294 TGGAGTCCTCCTTCATGTCAATCAGGAAGCAGGAAGAGAGTTGTGCTTGTGGTGTGCCAG 22235 Query 111960 CATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGGACATCTTGTCGTATGTC 112018 || ||||||||| || | || || |||| || | ||||||||| || ||| ||| Sbjct 22234 CAGCGAAGAGGGTCGGGGAAGCATGTGTGAAGCACTTC-TGGGACATCAGGTTGTAGGTC 22176 Query 112019 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTAC 112078 || | |||| || || || || ||||| ||||||| ||||||||||||| ||||| Sbjct 22175 TCGATCGCAGACTCGATATCCTCTCCGTGAATGCCGACGGCGACCCGCATGATCATGTGT 22116 Query 112079 TGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTG 112138 ||||| || || |||||||||| || | || || ||| ||||| ||| Sbjct 22115 TGTGGACGCTCGCAGATCTTGCCATCGAGACGGAGGAGGTATGAACGCTCGAGGGTCTTG 22056 Query 112139 AGACCAAAGTA 112149 | || ||||| Sbjct 22055 AAGCCGAAGTA 22045 >seq476 Length=728557 Score = 120 bits (132), Expect = 4e-22 Identities = 162/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||||||||||||||| ||||| || || ||||| |||||| ||||| Sbjct 288437 GGCAAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCATTGGAGAAGGTAAGACC 288378 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 | |||||| || |||||||||||||| | |||| | ||| || || |||||||| Sbjct 288377 AGCCATGAGGCCGCGCTTCTTCAACCAGAAGATAGAGGCGAAAGAGCCACTAAAGAAGAT 288318 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAA 122836 |||||| ||| || || || | ||| |||| || |||| | ||| | ||| | | | Sbjct 288317 ACCCTCGACAGCAGCGAATGCGACAAGACGTTGAGCAAAGGTG-GAGTCCTTGTCTTGGA 288259 Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 122879 |||| | | ||||| | |||||||||| || || || || Sbjct 288258 TCCATCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGGAC 288216 >seq620 Length=221796 Score = 96.9 bits (106), Expect = 4e-15 Identities = 162/228 (71%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGATTTCAAAGAG 11688 ||||| |||||||||||||||| |||||| ||| || | ||| | ||| || || || Sbjct 170063 GCATCGATCTCATCAATGAAGATAATACAAGGTGTGTTCTTC-CTGGCCATGGAGAAAAG 170005 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAG 11746 ||| | || | ||||| ||||||||||||||||||||||| | | | || || Sbjct 170004 ATCTCTCACTCGCGAAGCACCAACACCAACAAACATCTCCACAAACTCGGAACCGCTGA- 169946 Query 11747 CACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCC 11806 | || || ||| || || | || ||||| || | ||| || | || ||||| || Sbjct 169945 CGCT-GAAGAACGGTACTTGAGACTCACCAGCAGTAGCTTTCGCCAACAGCGTCTTACCA 169887 Query 11807 GTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA 11854 |||||||| || | |||| || ||||| |||||||| |||||| Sbjct 169886 GTACCTGGAGGTCCAGAAAGAATAGCACCTCGAGGGATCTTAGCACCA 169839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628015898829600