Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq438 154 4e-32 seq1523 127 6e-24 seq491 107 6e-18 >seq438 Length=237658 Score = 154 bits (170), Expect = 4e-32 Identities = 170/224 (76%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || || || ||||| |||||||| || | Sbjct 145234 TTTGCATACCACCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGT 145293 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | ||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct 145294 AGTCGGAGAGGGTTCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGTTGAT 145353 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681 | |||||||| ||||| || || ||||| || ||| || || || || |||| ||| || Sbjct 145354 CTGGAGGAATACCTTCCTTGTCTTGAATCTT-GCTCTTGACGTTGTCGATCGTATCGGAG 145412 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 | || ||||| || || | ||||| ||||| || || || || Sbjct 145413 GACTCGACTTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGAC 145456 Score = 136 bits (150), Expect = 1e-26 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||| | |||||| ||||| || ||||| || || | Sbjct 145006 TTTGCATACCACCACGAAGACGAAGAACCAAATGAAGCGTAGATTCCTTTTGGATGTTGT 145065 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || ||||| ||||| || || || ||||| || || || || | Sbjct 145066 AGTCGGACAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGT 145125 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || ||||| || || ||||| || | || || ||||| || | ||| || | Sbjct 145126 CTGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTATCGATGGTATCGGACG 145185 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || || | ||||||||||| || || || || || || ||||| Sbjct 145186 ATTCGACTTCGAGGGTGATAGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 122 bits (134), Expect = 3e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || ||||||||||| ||||| || || || || ||||| Sbjct 145519 CATACCACCGCGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATC 145578 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || ||||| || ||||| | ||| || ||||| || Sbjct 145579 CGAAAGGGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGG 145638 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| || || | || ||||| || || | |||||| | || Sbjct 145639 GGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTC 145698 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713 ||| || || || | ||||| ||||| Sbjct 145699 AACCTCGAGGGTGATGGTCTTGCCGGT 145725 Score = 95.1 bits (104), Expect = 4e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | ||| ||||||||||| || || || || || || Sbjct 144786 CCACCACGAAGACGGAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 144845 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 ||||| || ||||| || | || || ||||| ||||| | | ||||| || || || Sbjct 144846 AATGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAATCTCTGCTGGTCTGGTGGG 144905 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || || || ||||| ||||| || | || || || ||||| | || || | || || Sbjct 144906 ATACCCTCCTTATCTTGAATCTTTGACTTGACGTTGTCAATGGTGTCCGACGACTCCACC 144965 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || | ||| | |||||| || || | || || ||||| || ||||| Sbjct 144966 TCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 145012 >seq1523 Length=724860 Score = 127 bits (140), Expect = 6e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||||||||| ||||| ||||| || || ||||| || | ||||| || ||| Sbjct 230144 AGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAGAGGGTTCGGCCGTCT 230085 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || ||||| || ||||| ||||| || |||||||| || || || ||||| || || ||| Sbjct 230084 TCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 230025 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || | || ||||| || || | |||||| | || || || || || | ||| Sbjct 230024 TGGATCTTGGACTTGACATTGTCGATGGTATCAGACGACTCCACCTCGAGGGTGATAGTC 229965 Query 140706 TTTCCGGTTAGTGTTTTTAC 140725 || || || || || || || Sbjct 229964 TTGCCCGTGAGGGTCTTCAC 229945 >seq491 Length=357818 Score = 107 bits (118), Expect = 6e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | || || || || || ||||| |||||||||||||| Sbjct 80212 TTCTGGATGTTGTAGTCTGAAAGGGTACGGCCGTCCTCGAGTTGCTTTCCAGCAAAGATC 80271 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | || ||||| || || |||||||| || || ||||| || || | || ||||| || Sbjct 80272 AATCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 80331 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 |||| ||| || | || || ||||| || | |||||||| || || || |||||||| Sbjct 80332 ATCGTATCGGAGGACTCCACCTCAAGGGTGATAGTCTTTCCCGTAAGAGTCTTTACAAA 80390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515214581481953