Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq502 228 9e-55 seq476 89.7 6e-13 >seq502 Length=98925 Score = 228 bits (252), Expect = 9e-55 Identities = 516/765 (67%), Gaps = 38/765 (5%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGT--GAGACGTA 53250 ||||||| |||||| | || || ||||| || || || || || | || ||||| || Sbjct 22124 TCATGCGGGTCGCCGTCGGCATTCACGGAGAGGA-TAT-CGAGTCTGCGATCGAGACCTA 22181 Query 53251 CGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 | || | ||| ||| |||| ||| || || || | || ||||| ||| ||||| || Sbjct 22182 CAACCTGATGTCCCAGAAGTGCTTCACACATGCTTCCCCGACCCTCTTCGCTGCTGGCAC 22241 Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 || | || | || |||||||||| | | |||||||| ||||| |||||||| Sbjct 22242 ACCACAAGCACAACTCTCTTCCTGCTTCCTGATTGACATGAAGGAGGACTCCATCGACGG 22301 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG--- 53427 |||||||| || | ||| ||||| || |||||| | ||||| || || Sbjct 22302 TATCTACGACACATTGAAGACATGTGCTATGATTTCCAAGAATGCTGGTGGAATTGGCCT 22361 Query 53428 ---TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGT 53484 | ||||| |||| |||| |||| ||| | || || || |||||| Sbjct 22362 TAATGTCCAC----CGAA--TCCGCGCGACCGGTGCTTACATTGCTGGAACAAACGGCAA 22415 Query 53485 CGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCA 53544 | | |||| ||||| || ||||| || || ||||||||||| ||| | |||||| | || Sbjct 22416 CTCAAATGGCATCGTCCCCATGCTTCGTGTTTTCAACAACACCGCCAGATACGTCGATCA 22475 Query 53545 GGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACAT 53604 |||||| ||| | ||| | |||||||||||||||||||| ||||||||||| | Sbjct 22476 GGGTGGAAACAAGAGACCGGGTGCTTTCGCCATCTACCTCGAGCCATGGCACGCCGATGT 22535 Query 53605 TATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACC 53663 | ||||| || || || || |||||| || | ||||| | || ||| ||||| | Sbjct 22536 GTTTGAGTTCCTTGACCTCCGAAAGAATCACGGCAAGGAAGAAGTCCG-TGCTCGTGATC 22594 Query 53664 TGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAG 53722 | || ||| || |||||||||| || || |||||| | || |||||| | | || Sbjct 22595 TCTTCTAC-GCCTTGTGGATTCCTGATCTGTTCATGAAGCGTGTTGAGAAGAATGGAGAA 22653 Query 53723 TGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT-- 53780 ||| |||||||| || ||||||||||| ||||| | ||||||||| || || | Sbjct 22654 TGGACTCTGATGTGTCCCAACGAGTGCCCAGGCCTAGCTGATGTCTACGGCGATGAATTC 22713 Query 53781 -------TTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTC 53833 || |||||| ||| || ||| | || |||| ||| || | || Sbjct 22714 GAGGCTCTTTACGAGAAGTA-CGAGCGT--GAAGGAAAGGGTCGC------AAAACCATC 22764 Query 53834 AAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTAC 53893 ||||| | || | ||| || | || || || ||| ||||| |||| || | | Sbjct 22765 AAGGCTCAGAAGCTCTGGTATTCCATTCTGGAGGCACAGACTGAGACCGGAAACCCTTTC 22824 Query 53894 ATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||| ||||||||| | |||| || ||||||||||||||| Sbjct 22825 ATGTTGTACAAGGATGCTTGCAACAGAAAAAGCAACCAGAAGAAC 22869 >seq476 Length=728557 Score = 89.7 bits (98), Expect = 6e-13 Identities = 95/124 (77%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 ||||| || || | ||| |||| ||| || || |||||||||||||| ||||| | | Sbjct 288397 TCATTGGAGAAGGTAAGACCAGCCATGAGGCCGCGCTTCTTCAACCAGAAGATAGAGGCG 288338 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 || || ||||| |||||||| || |||||| || || |||||||| ||||| || || Sbjct 288337 AAAGAGCCACTAAAGAAGATACCCTCGACAGCAGCGAATGCGACAAGACGTTGAGC-AAA 288279 Query 74910 GGTG 74913 |||| Sbjct 288278 GGTG 288275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547201970749800