Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq438 154 1e-32 seq1523 95.1 1e-14 >seq438 Length=237658 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||||||| ||| |||| || || ||||| ||| ||||| Sbjct 145240 ATGCAAATCTTCGTCAAGACCCTGACCGGAAAGACTATCACCCTCGAAGTCGAATCGTCC 145181 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| ||| ||||||||||| ||||| || ||||| || ||| Sbjct 145180 GATACCATCGATAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAA 145121 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| ||| | |||||| | || | ||||| |||||| Sbjct 145120 CAGCGCCTCATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACTCTGTCCGACTACAAC 145061 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || | ||||||||| | ||| | || ||||| || Sbjct 145060 ATCCAAAAGGAATCTACGCTTCATTTGGTTCTTCGTCTTCGTGGTGGTAT 145011 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || || ||||||||| | || ||||| ||||| || | ||||| |||| || Sbjct 145456 GTCAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGAGTCCTCCGATACGATCGAC 145397 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || ||||||||||| ||||| || || || |||||||| ||| | || Sbjct 145396 AACGTCAAGAGCAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAACGTCTTATC 145337 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||| || || ||| | ||||| | ||| | ||||| |||||||||||||||||| Sbjct 145336 TTCGCTGGAAAGCAACTTGAAGATGGCCGAACCCTCTCCGACTACAACATTCAAAAGGAG 145277 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||| | || ||||| | ||| | || ||||| || Sbjct 145276 TCCACCCTCCACTTGGTCCTCCGTCTCCGTGGTGGTAT 145239 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||||||| | || || || || || || | || || | || || | ||||| Sbjct 145725 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCTGATACCATCGACAATGTCAAGTCC 145666 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || ||||| |||||||| || || |||||||||||||| || | |||||| || Sbjct 145665 AAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAACAGCGTTTGATCTTCGCCGGAAAG 145606 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || ||| || ||| |||| ||||||||||| || |||||||| || | ||| Sbjct 145605 CAGCTCGAGGACGGTCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCCACTCTTCAT 145546 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || | ||| | || ||||| || Sbjct 145545 CTCGTCCTCCGTCTCCGCGGTGGTAT 145520 >seq1523 Length=724860 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || || || |||||| |||| || || || ||||| |||| || | || || Sbjct 229945 GTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCTGATACCATCGAC 230004 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || || || ||||| || || || ||||| || || || || | || Sbjct 230005 AATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAACGCCTGATC 230064 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||| ||||| ||| | |||||| | ||| | |||||||||||||| ||||||||| Sbjct 230065 TTCGCTGGCAAGCAACTCGAAGACGGCCGAACCCTCTCCGATTACAACATCCAAAAGGAG 230124 Query 27180 TCGAC 27184 || || Sbjct 230125 TCCAC 230129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434907249779520