Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1523 190 5e-43 seq438 172 1e-37 seq491 134 3e-26 >seq1523 Length=724860 Score = 190 bits (210), Expect = 5e-43 Identities = 170/213 (80%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | ||||| || |||||||||||||| ||||||||||| ||||| | || Sbjct 230157 TCCACGAAGACGAAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAGAG 230098 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | || ||||| || |||||||| |||||||| |||||||| ||||| || || | Sbjct 230097 GGTTCGGCCGTCTTCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGCTGGTCCGGTGGGAT 230038 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| ||||||||||||||||| || || || |||||||| ||||| || ||||| Sbjct 230037 TCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGACGACTCCACCTC 229978 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||| ||||| ||||| |||||||| ||||| || Sbjct 229977 GAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 229945 >seq438 Length=237658 Score = 172 bits (190), Expect = 1e-37 Identities = 152/190 (80%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || |||||||||||||| || |||||||| ||||||| |||||| | || || Sbjct 145538 AGGACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCC 145597 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || ||||| || || |||| |||||||||||| Sbjct 145598 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATGCCTTCCTTGTCC 145657 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||| |||||| ||||||||||| ||||| ||| Sbjct 145658 TGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCAACCTCGAGGGTGATGGTC 145717 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 145718 TTGCCGGTGA 145727 Score = 163 bits (180), Expect = 7e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || |||||||| ||||| ||||| || || | ||||| | |||||| Sbjct 145257 AGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTTCGGCCATCT 145316 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||||||||| |||||||| || ||||||| ||||||||||| Sbjct 145317 TCAAGTTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTGTCT 145376 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| || || ||| || || ||||||||||| ||| Sbjct 145377 TGAATCTTGCTCTTGACGTTGTCGATCGTATCGGAGGACTCGACTTCGAGAGTGATGGTC 145436 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || ||||| ||||| || Sbjct 145437 TTGCCGGTGAGGGTCTTGAC 145456 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||||| || || || ||||||||||| || || | || || Sbjct 145019 ACGAAGACGAAGAACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGT 145078 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| || |||||||| |||||||| ||||| |||||||| || || | || Sbjct 145079 GCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACC 145138 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| || |||||| || ||||| |||||||| || || ||| || ||||| Sbjct 145139 TTCCTTGTCTTGAATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAG 145198 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| || || ||||| || || | ||||| Sbjct 145199 GGTGATAGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 >seq491 Length=357818 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | |||||| | || || || || ||||| || || ||||| Sbjct 80212 TTCTGGATGTTGTAGTCTGAAAGGGTACGGCCGTCCTCGAGTTGCTTTCCAGCAAAGATC 80271 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || ||||| || |||| ||| ||||||||||||||||| || || || ||| Sbjct 80272 AATCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 80331 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || || || ||| || ||||| || ||||| ||||||||||| |||||||||||||| Sbjct 80332 ATCGTATCGGAGGACTCCACCTCAAGGGTGATAGTCTTTCCCGTAAGAGTCTTTACAAA 80390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159121539296615