Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq438 104 2e-17 >seq438 Length=237658 Score = 104 bits (114), Expect = 2e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680 |||| || |||||||| || || || |||||||||||||| || ||| | || || | | Sbjct 145458 TCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGAGTCCTCCGATACGATCG 145399 Query 23681 AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 | | | || || ||| ||||| |||||| | || ||||||||||| ||| | | Sbjct 145398 ACAACGTCAAGAGCAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAACGTCTTA 145339 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | || || || || ||||| ||||| | || || | ||| |||||||| ||||| | Sbjct 145338 TCTTCGCTGGAAAGCAACTTGAAGATGGCCGAACCCTCTCCGACTACAACATTCAAAAGG 145279 Query 23801 AGTCCAC 23807 ||||||| Sbjct 145278 AGTCCAC 145272 Score = 93.3 bits (102), Expect = 3e-14 Identities = 130/178 (73%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 23633 TCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAA 23691 |||| || || || ||||| ||||| ||||| ||| | || || | || ||| | || Sbjct 145727 TCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCTGATACCATCGACAATGTCAAGT 145668 Query 23692 CAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGC 23751 | || | | ||||| ||||| | || ||||||||||||||||| || || ||||| Sbjct 145667 CCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCAACAGCGTTTGATCTTCGCCGGA 145609 Query 23752 AAACAACTGGAAGACGAACGCAC--TTTAGGCGATTACAACATACAAAAAGAGTCCAC 23807 || || || || |||| ||||| ||| || |||||||||| || || |||||||| Sbjct 145608 AAGCAGCTCGAGGACGGTCGCACCCTTTCGG--ATTACAACATCCAGAAGGAGTCCAC 145553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338001150921908