Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1523 150 4e-31 seq438 145 2e-29 >seq1523 Length=724860 Score = 150 bits (166), Expect = 4e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| || || |||||||| || ||||||| |||||||||| | || Sbjct 230154 ACGAAGACGAAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAGAGGGT 230095 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || ||||| || ||||| ||||||||||| || ||||| ||||| || || || || Sbjct 230094 TCGGCCGTCTTCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGCTGGTCCGGTGGGATTCC 230035 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| |||||||| || || | ||||| || | Sbjct 230034 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGACGACTCCACCTCGAG 229975 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||||||||| Sbjct 229974 GGTGATAGTCTTGCCCGT 229957 >seq438 Length=237658 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | |||||| ||||| || ||||| | ||||| |||| | |||| |||||| Sbjct 145257 AGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTTCGGCCATCT 145316 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| |||||||||||||| |||||||| || || |||||||||||||||||| Sbjct 145317 TCAAGTTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCTTCCTTGTCT 145376 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| || || |||| || || || | ||||| ||| Sbjct 145377 TGAATCTTGCTCTTGACGTTGTCGATCGTATCGGAGGACTCGACTTCGAGAGTGATGGTC 145436 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 145437 TTGCCGGT 145444 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || || || ||||| ||||||| ||||| |||| || ||| Sbjct 145019 ACGAAGACGAAGAACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGT 145078 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || ||||| || |||||||| || || |||||||| || || ||||| Sbjct 145079 GCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACC 145138 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||| |||||| ||| || |||||||| || || | ||| || || | Sbjct 145139 TTCCTTGTCTTGAATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAG 145198 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || |||| || || | ||| | |||||| Sbjct 145199 GGTGATAGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | |||||||| || || || |||| ||||| ||| ||| || Sbjct 144791 ACGAAGACGGAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAATGT 144850 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| ||||||||||| | || || ||||| || || ||||| Sbjct 144851 ACGACCATCCTCCAACTGCTTACCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATACC 144910 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| |||||| ||| || || |||||||| || | ||||| || || Sbjct 144911 CTCCTTATCTTGAATCTTTGACTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCCAA 144970 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| |||||||| || | || | |||||| Sbjct 144971 TGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 145012 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || |||||||| || || |||| |||||||| | | || | || || Sbjct 145538 AGGACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGACCGTCC 145597 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || ||||| || || ||||| ||||||||||| Sbjct 145598 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATGCCTTCCTTGTCC 145657 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||| || |||| || || || | ||||| ||| Sbjct 145658 TGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCAACCTCGAGGGTGATGGTC 145717 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 145718 TTGCCGGT 145725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192499862143394