Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq476 93.3 6e-14 >seq476 Length=728557 Score = 93.3 bits (102), Expect = 6e-14 Identities = 219/328 (67%), Gaps = 7/328 (2%) Strand=Plus/Minus Query 46525 GGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGTT 46584 || |||||||| || | ||||| ||||| || ||||| || | |||| || || Sbjct 288544 GGAAGAGCCTCAGTCAAGAACTCCTGTTCGATCTCAACAGCCTCGGTAATTAC--ATCTT 288487 Query 46585 --ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCAC 46642 |||| | || ||||| | ||| |||| || ||| | | || ||||| || Sbjct 288486 GGACTGCCTTCTTGCTTGGGCGGTGCTTCAAGTGGGAAAAGAGAAGGCAGGCAAAGTCGG 288427 Query 46643 AATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTC 46702 || || || ||||| | || | || || || || || || |||| ||| || | Sbjct 288426 TGTGGAGACCCTCATCACGGGAGATGAGCTCATTGGAGAAGGTAAGACCAGCCATGAGGC 288367 Query 46703 CACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAG 46762 | ||||| || | ||| || |||| |||||||| ||| |||||| || || || |||| Sbjct 288366 CGCGCTTCTTCAACCAGAAGATAGAGGCGAAAGAGCCACTAAAGAAGATACCCTCGACAG 288307 Query 46763 CCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT---ATGAATCCACCTTTGAG 46819 | |||||||||||||| | | | | ||| || || || ||||| || || Sbjct 288306 CAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTCCTTGTCTTGGATCCATCTGACAG 288247 Query 46820 CCCAATCAGCCTTTTTCTTTACACAAGG 46847 ||||||| ||||| ||||| | ||||| Sbjct 288246 CCCAATCGGCCTTCTTCTTGATGCAAGG 288219 Score = 87.8 bits (96), Expect = 3e-12 Identities = 200/295 (68%), Gaps = 7/295 (2%) Strand=Plus/Minus Query 46891 TCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCC 46950 || || | |||||| || || | ||| || | || || || ||||| || || Sbjct 288127 TCCTTGATATATGTGTCGATGAGGAGAGAGTATGTCTCGGAGTGGATGTTCTCCATCATG 288068 Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010 || || || ||||| || || | || |||| |||||| ||||| || || || ||| Sbjct 288067 ATTTGGAAACCGTAGAAGCAGCGAGCCTCAGGAATCTGGACCTCACCACTGAAGCGCTCA 288008 Query 47011 GACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAAT 47069 |||| ||||| || || ||||| ||| || || || || || | || || ||| Sbjct 288007 -ACAAGGTTCTCGTTGACGATTCCGTCAGATGCGGCGAAGAAAGCGAGGACGTGGGAAAT 287949 Query 47070 AAAATAT---TTTTCATCGGT-AGTCAGTTTATTCCAGTCATTGATATCTTTTGATATAT 47125 |||||| | |||||| | ||| ||| ||||||||| | | ||| || || | || Sbjct 287948 AAAATAGCGCTCGTCATCGTTGAGTTTGTT-ATTCCAGTCGTGAAGATCCTTGGAAAGAT 287890 Query 47126 CTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 | | ||||| || |||||||| || ||||| || || || ||||| | ||| || Sbjct 287889 CAATCTCTTCTGCGGTCCAGAAAGATGCCTCAGCCTTCTTGTACATCTGCCAGAT 287835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712916122144320