Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1523 140 7e-28 seq438 122 2e-22 >seq1523 Length=724860 Score = 140 bits (154), Expect = 7e-28 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||||||||| ||||| ||||||||||||||||||| | |||| || ||| Sbjct 230144 AGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAGAGGGTTCGGCCGTCT 230085 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| || | |||||||||| | |||||| ||||| || Sbjct 230084 TCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 230025 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | | | || || ||| || || || || ||||| Sbjct 230024 TGGATCTTGGACTTGACATTGTCGATGGTATCAGACGACTCCACCTCGAGGGTGATAGTC 229965 Query 152073 TTGCCCGTGAGAGTCTTCACGA 152094 ||||||||||| |||||||||| Sbjct 229964 TTGCCCGTGAGGGTCTTCACGA 229943 >seq438 Length=237658 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| ||||| || |||||||||||||| |||| | ||| | || ||| Sbjct 145029 AGAACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCT 145088 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||| ||||| | | ||| |||||||| ||| Sbjct 145089 TCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGGATACCTTCCTTGTCT 145148 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| ||||| | || | | | || || || ||||| || || ||||| Sbjct 145149 TGAATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGACTTCGAGGGTGATAGTC 145208 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||||| ||||| Sbjct 145209 TTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| ||||||||||| || ||||||||||| ||| || || | ||||| Sbjct 144800 GAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAATGTACGACCATC 144859 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || | || || |||||||| | ||||||||||| | | ||| || ||||| || Sbjct 144860 CTCCAACTGCTTACCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATACCCTCCTTATC 144919 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| ||| ||||| | || | | |||| || ||| || || | || || || Sbjct 144920 TTGAATCTTTGACTTGACGTTGTCAATGGTGTCCGACGACTCCACCTCCAATGTGATTGT 144979 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || | |||||| || |||| ||||| Sbjct 144980 CTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 145012 Score = 105 bits (116), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || ||||| ||||| |||||||| |||| | |||| Sbjct 145250 GAGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTTCG 145309 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 |||||||| || ||||| || ||||||||||| | || || || | | || ||| Sbjct 145310 GCCATCTTCAAGTTGCTTT--CCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCT 145367 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| |||||||| || ||||| | || | | || || ||| ||||| ||| Sbjct 145368 TCCTTGTCTTGAATCTTGCTCTTGACGTTGTCGATCGTATCGGAGGACTCGACTTCGAGA 145427 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 || || || ||||| ||||| ||||| |||| Sbjct 145428 GTGATGGTCTTGCCGGTGAGGGTCTTGACGA 145458 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||||||||| ||||| || |||||||||||||| | | || | Sbjct 145531 GAGACGGAGGACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCG 145590 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || || || ||||| ||||||||||| | | ||| || || | | || ||| Sbjct 145591 ACCGTCCTCGAGCTGCTTT--CCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATGCCT 145648 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || |||||| | || | | | || || ||| || || || Sbjct 145649 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCAACCTCGAGG 145708 Query 152064 GTAATAGTTTTGCCCGTGA 152082 || || || ||||| |||| Sbjct 145709 GTGATGGTCTTGCCGGTGA 145727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153790479392221