Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq438 167 6e-36 seq1523 165 2e-35 seq491 125 2e-23 seq502 93.3 1e-13 >seq438 Length=237658 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || ||||| || ||||||||||| || ||| || || Sbjct 145237 CAAATCTTCGTCAAGACCCTGACCGGAAAGACTATCACCCTCGAAGTCGAATCGTCCGAT 145178 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||||||| ||||| ||||| ||||| || ||||| || Sbjct 145177 ACCATCGATAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAACAG 145118 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || || |||||||| || | ||||| |||| || ||| || Sbjct 145117 CGCCTCATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACTCTGTCCGACTACAACATC 145058 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||| ||||| || || ||| | ||| Sbjct 145057 CAAAAGGAATCTACGCTTCATTTGGTT 145031 Score = 132 bits (146), Expect = 1e-25 Identities = 149/198 (75%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| || || || ||||| ||||| || || ||| || || |||| Sbjct 145458 TCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTCGAGTCCTCCGATACGATCG 145399 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | |||||||| |||||||| ||||| ||||| || ||||| || || ||||| |||| Sbjct 145398 ACAACGTCAAGAGCAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAACGTCTTA 145339 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| ||||| || || |||||||| | || || |||| || ||| | ||||| | Sbjct 145338 TCTTCGCTGGAAAGCAACTTGAAGATGGCCGAACCCTCTCCGACTACAACATTCAAAAGG 145279 Query 178111 AATCAACACTGCATCTTG 178128 | || || || || |||| Sbjct 145278 AGTCCACCCTCCA-CTTG 145262 Score = 131 bits (144), Expect = 4e-25 Identities = 141/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||||||||| || ||| || |||||||| || ||||| Sbjct 145727 TCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCTGATACCATCGACAATGTCAAGT 145668 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| |||||||| ||||| || || || || || || || | ||||||||||||| Sbjct 145667 CCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAACAGCGTTTGATCTTCGCCGGAA 145608 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | |||||||| || || | || ||| | ||||| ||| |||| || || || || || | Sbjct 145607 AGCAGCTCGAGGACGGTCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCCACTCTTC 145548 Query 178123 ATCTTGT 178129 |||| || Sbjct 145547 ATCTCGT 145541 >seq1523 Length=724860 Score = 165 bits (182), Expect = 2e-35 Identities = 156/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 ||||||| || ||||| || || || ||||||||||||||||| || || ||||||| Sbjct 229943 TCGTGAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGTCTGATACCATCG 230002 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| ||||| |||||||| || |||||||| |||||||||||||| || | Sbjct 230003 ACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAACGCCTGA 230062 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| || || || |||||||| || | || || ||||||| ||| ||||||| | Sbjct 230063 TCTTCGCTGGCAAGCAACTCGAAGACGGCCGAACCCTCTCCGATTACAACATCCAAAAGG 230122 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || ||||| || Sbjct 230123 AGTCCACTCTTCATCTCGT 230141 >seq491 Length=357818 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 || || || ||||| || ||||| || |||||||| |||||||| ||| || || ||| Sbjct 80390 TTTGTAAAGACTCTTACGGGAAAGACTATCACCCTTGAGGTGGAGTCCTCCGATACGATC 80331 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || ||||| || ||||||||||| ||| | Sbjct 80330 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGATTG 80271 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || ||||| || ||||| || || | || ||| | || || ||| |||| || Sbjct 80270 ATCTTTGCTGGAAAGCAACTCGAGGACGGCCGTACCCTTTCAGACTACAACATCCAGAA 80212 >seq502 Length=98925 Score = 93.3 bits (102), Expect = 1e-13 Identities = 182/265 (69%), Gaps = 8/265 (3%) Strand=Plus/Minus Query 214128 GTTTTTCTGGTTGCTTTTGCGG---CAAATGGCATCTTTGTATGCGATGAAAGGCATTCC 214184 ||| |||||||||||||| | | ||| ||||| ||||| |||||||| |||| Sbjct 22869 GTTCTTCTGGTTGCTTTTTCTGTTGCAA---GCATCCTTGTACAACATGAAAGGGTTTCC 22813 Query 214185 CACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTT 214244 ||| || || | |||||| || |||||| | || ||||| | | ||| Sbjct 22812 GGTCTCAGTCTGTGCCTCCAGAATGGAATACCAGAGCTTCTGAGCCTTGATGGT-TTTGC 22754 Query 214245 GGCTCTTCCCT-CGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACAT 214303 | | ||| ||| | |||||||| || ||||||| ||| ||||| |||||||||| Sbjct 22753 GACCCTTTCCTTCACGCTCGTACTTCTCGTAAAGAGCCTCGAATTCATCGCCGTAGACAT 22694 Query 214304 CATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTC 214363 || | || || || ||||||||| || | ||| |||||| |||||| | | || | Sbjct 22693 CAGCTAGGCCTGGGCACTCGTTGGGACACATCAGAGTCCATTCTCCATTCTTCTCAACAC 22634 Query 214364 TTTTCATGAAAAGGTCGGAAGTCCA 214388 |||||||| || || | | |||| Sbjct 22633 GCTTCATGAACAGATCAGGAATCCA 22609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203699567824894