Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1523 123 2e-23 seq438 118 1e-21 seq491 104 2e-17 >seq1523 Length=724860 Score = 123 bits (136), Expect = 2e-23 Identities = 160/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || ||| |||||| || ||||| || |||||| Sbjct 230159 CCTCCACGAAGACGAAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAG 230100 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||| |||||||| ||||| |||||||| || ||||||| || Sbjct 230099 AGGGTTCGGCCGTCTTCGAGTTGCTTGCCAGCGAAGATCAGGCGTTGCTGGTCCGGTGGG 230040 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| || | || | || || |||||||| Sbjct 230039 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTATCAGACGACTCCA 229982 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 |||| | || || || || ||||| || ||||| |||| Sbjct 229981 CCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGA 229943 >seq438 Length=237658 Score = 118 bits (130), Expect = 1e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||| || ||| ||||||||| ||||| || || || Sbjct 145523 CCACCGCGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 145582 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||||||||| |||||||| |||| |||||||| || | |||| Sbjct 145583 AGGGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGA 145642 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || ||||||||| ||| || Sbjct 145643 ATGCCTTCCTTGTCCTGGATCTT 145665 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||| ||||| ||||| || ||||| |||||||| Sbjct 145014 CCACCACGAAGACGAAGAACCAAATGAAGCGTAGATTCCTTTTGGATGTTGTAGTCGGAC 145073 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| ||||| |||||||||||||| || |||||||||||||| | || Sbjct 145074 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGG 145133 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||| | ||| | |||| | ||| | | || ||| ||| || || Sbjct 145134 ATACCTTCCTTGT-CTTGAATCTTTGACTTGACGTTATCGATGGTATCGGACGATTCGAC 145192 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || ||||| ||||| ||||| || ||||| Sbjct 145193 TTCGAGGGTGATAGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 145240 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| ||| || || ||||||||| ||||| |||||| Sbjct 144785 GCCACCACGAAGACGGAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 144844 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || || | || || | |||||| || ||||| |||| | ||| ||||| | || Sbjct 144845 CAATGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAATCTCTGCTGGTCTGGTGG 144904 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813 | | |||||| || ||| | |||| | ||| | || | |||| |||||||| Sbjct 144905 GATACCCTCCTTATCT-TGAATCTTTGACTTGACGTTGTCAATGGTGTCCGACGACTCCA 144963 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || |||| ||||| || || || ||||| Sbjct 144964 CCTCCAATGTGATTGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 145012 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || ||| |||||| |||||||| ||||||||| Sbjct 145242 CCACCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAG 145301 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || || ||||| || ||||| || || || ||||| || | ||| Sbjct 145302 AGGGTTCGGCCATCTTCAAGTTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 145361 Query 41756 ACGCTCTCCTTGTC 41769 | | |||||||| Sbjct 145362 ATACCTTCCTTGTC 145375 >seq491 Length=357818 Score = 104 bits (114), Expect = 2e-17 Identities = 134/183 (73%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||| || ||||| || |||| ||||| ||||| || || || | Sbjct 80210 CCTTCTGGATGTTGTAGTCTGAAAGGGTACGGCCGTCCTCGAGTTGCTTTCCAGCAAAGA 80269 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 ||| ||||| ||||||| ||||| | |||||||||| ||| || ||| || | Sbjct 80270 TCAATCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 80329 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 ||| || ||| ||||||||||| | || || || || ||||| || |||||||| Sbjct 80330 CGATC--GTATCGGAGGACTCCACCTCAAGGGTGATAGTCTTTCCCGTAAGAGTCTTTAC 80387 Query 41851 GAA 41853 || Sbjct 80388 AAA 80390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462292147681200