Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq11 111 3e-19 >seq11 Length=1047007 Score = 111 bits (122), Expect = 3e-19 Identities = 186/264 (70%), Gaps = 4/264 (2%) Strand=Plus/Minus Query 230376 GGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTAT 230435 |||| || | ||||| || ||||| || | || | |||||| | |||||| | Sbjct 556545 GGTCCAAGACATCATCACTGAAGCCGTCACGATTGAGCAAGAGTTCCTGACGGACGCTCT 556486 Query 230436 TCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAG 230494 || ||| || || ||||||||||| | | || ||| |||||||||| || ||||| | Sbjct 556485 CCC-TGTAGCACTGCTTGGCATGAACTCGAATCTCATGAGACAGTACATTGAGTTCGTGG 556427 Query 230495 CCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG-TACAACTCTAAGAACCCCTTT 230553 | ||||| | | | ||||| || | | || || |||||| || || || || Sbjct 556426 CTGACCGTCTCCTCCTGGCACTCGGCAATCA-AAGGTACTACAACGTTAGCAATCCGTTC 556368 Query 230554 GCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGT 230613 | ||||||||| ||| ||||| ||| ||||| ||||||||||| ||||| || || Sbjct 556367 GACTTTATGGAGAACATCTCGCTATCAGGCAAGACGAACTTCTTCGAGAAGCGCGTGGGT 556308 Query 230614 GACTATCAGAGGCCTGGTGTGATG 230637 ||||| |||| | ||||||| ||| Sbjct 556307 GACTACCAGAAGGCTGGTGTCATG 556284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823728932600