Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq11 156 5e-33 >seq11 Length=1047007 Score = 156 bits (172), Expect = 5e-33 Identities = 330/487 (68%), Gaps = 4/487 (1%) Strand=Plus/Plus Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770 |||||||||||||||||||| | || | | | | | || | |||||||||||||| Sbjct 148312 GATGCCAGATTACAAACGGCGATTTCGTCCGGAGCAGTGTACTCGATTATCTCAGTGCAG 148371 Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830 ||||| | || |||| || | || | ||| || || || |||||| |||||| Sbjct 148372 AGATTCGAGCTCTGGATGACGCCAAGGTTCTTTTGGTTGCTTTTGCGGTTACAGGCATCC 148431 Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACG 53890 || || || ||| | || || ||||| |||| |||| || | ||| || ||| | | Sbjct 148432 TTGTAGAGCATGTACGGAGTGCCAGTCTCAACTTGGGCGTCCAGAATTGCACGCCATAGG 148491 Query 53891 ACACGAGCCTTTATTATAGATTTGTAT-CTCTTTTCTCTTTCGTATAGTGTATACAATCG 53949 | |||| || | | || | | |||| | || ||| || |||| || Sbjct 148492 ATGTGAGCGGGAATGGTCC-TGCGTCCACGCCTTTCCTTCTCATATCGTTCGTACAG-CG 148549 Query 53950 T-TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACG 54008 | ||||| || | ||| |||||| || || || ||||| ||||| |||||||||| Sbjct 148550 TCTCAAAATCTTGTCCGTAAACATCAGGCAGCCCCGGGCATTCGTCCGGGCACATCAACG 148609 Query 54009 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 54068 ||| ||| ||| | || || || ||||| || || | ||| ||||| || || ||| Sbjct 148610 TCCAATCTTCGTTTTGCTCAACGCGCTTCATGAACAGGTTAGGGATCCAGAGTGCATTAA 148669 Query 54069 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 54128 | ||||| | || | || ||| || || || |||||| ||| || ||||| || | Sbjct 148670 AAAGATCGCGGGCACGATTTTCTTCTTTGCCGTGATTCTTGCGAAGGTCTAGGAAAGCAA 148729 Query 54129 TAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTC 54188 | ||| | ||||| || |||||||||| || | ||||||| ||||||||||| | Sbjct 148730 ACACATCCGCGTGCCAGGGCTCCAAGTATACGGCAAATGCTCCAGGGCGTTTGTTTCCCC 148789 Query 54189 CCTGATC 54195 | ||||| Sbjct 148790 CTTGATC 148796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721451569600