Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq11 185 9e-42 seq16 129 6e-25 seq15 114 1e-20 seq18 109 6e-19 >seq11 Length=1047007 Score = 185 bits (204), Expect = 9e-42 Identities = 214/285 (75%), Gaps = 5/285 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| ||||||||||| | |||||| | || ||| Sbjct 557197 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACGGCAGAGGAGATCGATCTG 557138 Query 116696 TCCAAGGA-CACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 || ||||| | | | ||||||| | ||| | ||||| ||||||| |||||| Sbjct 557137 TCGAAGGATCTCCA-CGACTGGAACAAGCGTCTCAACGATGACGAGCGGTTCTTCATCTC 557079 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| || ||||| ||||||||| || |||||||||||||| || || |||||||| Sbjct 557078 CCACGTCCTCGCCTTCTTCGCCGCCTCGGATGGCATCGTCAACGAAAACCTAGTCGAGCG 557019 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| | || || ||| | | ||||| || |||||||||||||| |||||| || Sbjct 557018 CTTCTCATCCGAAGTACAGATCCCAGAGGCCCGATGCTTCTACGGCTTCCAGATCATGAT 556959 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 ||||||| | || ||||| | ||| ||| ||||| ||||| || Sbjct 556958 GGAGAACATCCATTCGGAGACGTACTCGCTGCTCATTGACACATA 556914 Score = 132 bits (146), Expect = 5e-26 Identities = 318/471 (68%), Gaps = 20/471 (4%) Strand=Plus/Minus Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC 117028 || ||| ||||| ||||||| || ||||| || || |||||| | || || | | | Sbjct 556808 CCATGCATCAAAAAGAAGGCAGACTGGGCTCTCCGATGGATCTC-GGATGACAACTCCAC 556750 Query 117029 TTCGGCGAGC-GCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTT 117087 | || || | || | || ||||| ||||| ||||| ||||||| ||| || Sbjct 556749 GTTTGCTTGCCGATTGATTGCATTCGCCGCCGTAGAGGGTATCTTCTTCAGCGGCTCCTT 556690 Query 117088 CGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGA 117147 || || || || ||||||||||| || ||||||||| | || || |||||| |||||| Sbjct 556689 TGCAGCAATCTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGTCTCACTTTCTCCAACGA 556630 Query 117148 GCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTT 117207 ||||||||| | |||||||| |||| ||||||||||| ||||||||| ||| | Sbjct 556629 GCTCATCTCGCGTGACGAGGGCATGCACACTGACTTTGCCTGCTTGCTGTTCTCGCACCT 556570 Query 117208 GGTGCAGCGACCGAGCGCGGCGCGC-----GTCAGGGAGATCGTCACCGACGCGGTCGCC 117262 || || | ||| || | || ||| || ||| |||| || || ||| | Sbjct 556569 ----CA-AGAACAAGCCCGACCAGCAATTGGTCCAAGACATCATCACTGAAGCCGTCACG 556515 Query 117263 ATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAA 117322 || ||||| ||||| || || || || || || ||||| || | || | |||| Sbjct 556514 ATTGAGCAAGAGTTCCTGACGGACGCTCTCCCTGTAGCACTGCTTGGCATGAACT-CGAA 556456 Query 117323 AC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGC-G 117380 | ||| || ||||| |||||||| || ||| | || || || | | ||||| Sbjct 556455 TCTCATGAGACAGTACATTGAGTTCGTGGCTGACCGTCTCCTCCTGGCAC---TCGGCAA 556399 Query 117381 CCAA--GCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 ||| | |||||||| ||| ||| | ||||||||| | |||||| Sbjct 556398 TCAAAGGTACTACAACGTTAGCAATCCGTTCGACTTTATGGAGAACATCTC 556348 >seq16 Length=1709166 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| || || ||||||||| | || || ||| | || Sbjct 1053550 ATGCAGATCTTCGTCAAGACGCTCACTGGAAAGACCATCACCCTTGAGGTTGAATCTTCC 1053609 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| |||||||| || | ||||| Sbjct 1053610 GACACCATCGACAACG-TCAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCA 1053668 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || ||||| || |||| || || ||| |||||||| Sbjct 1053669 GCAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACTCTCTCTGACTACAA 1053728 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| ||||| |||| ||||||| || Sbjct 1053729 CATCCAAAAGGAATCCACTTTGCATCTTGT 1053758 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||||||||| || | || || ||| | | Sbjct 1053778 ATGCAGATCTTCGTCAAGACACTCACCGGCAAAACCATAACTTTGGAAGTGGAATCATCA 1053837 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| || || ||||||||||| | ||||| Sbjct 1053838 GACACAATCGACAACG-TCAAGTCGAAGATTCAAGATAAGGAGGGCATCCCTCCTGACCA 1053896 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||| |||| |||| || || ||| || ||||| Sbjct 1053897 GCAGCGCCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGCCGAACGCTCTCGGATTACAA 1053956 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | || |||| | ||| |||| Sbjct 1053957 TATCCAGAAGGAGTCGACCTTGCACTTGGTGCTGCG 1053992 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 ||||| || ||||||||| | || || || | |||||| | | | | ||||| Sbjct 1053346 ACGGGAAAGACCATCACCCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGAGC 1053405 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || |||| ||||| |||||||| || | |||||||| || || |||| || || || Sbjct 1053406 AAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTTGCTGGAAAG 1053465 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 || || || || | |||||||| |||||||||||| ||||||||| ||||||| ||| Sbjct 1053466 CAACTTGAGGATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACGCTCCAT 1053525 Query 40894 CTAGTGTTGCG 40904 || ||| |||| Sbjct 1053526 CTCGTGCTGCG 1053536 >seq15 Length=1704560 Score = 114 bits (126), Expect = 1e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| ||| | |||||||| || || |||| ||| ||||| |||||||| Sbjct 828690 GACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAA 828631 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| |||||||| |||||||||||||||||||||| | || || || || ||| | Sbjct 828630 GACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 828571 Query 40903 CGCTTGAGGGGCGGCGGC 40920 || | | ||||| ||| Sbjct 828570 CGTCTCCGTGGCGGTGGC 828553 >seq18 Length=1930349 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGT- 40757 ||||| || || ||||||||||| || |||||| |||| || || | | ||||| | | Sbjct 1554063 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACCATC 1554122 Query 40758 GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||| ||| | ||||| || || || Sbjct 1554123 GACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCT 1554181 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| || || || ||||| || || | || || || | |||||||||||||||||| Sbjct 1554182 GATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGGACTCTGAGCGACTACAACATCCAGAA 1554241 Query 40878 GG 40879 || Sbjct 1554242 GG 1554243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219071195200