Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq16 89.7 8e-13 >seq16 Length=1709166 Score = 89.7 bits (98), Expect = 8e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | |||||||| || |||||||| |||||| | || | ||| || Sbjct 1053778 ATGCAGATCTTCGTCAAGACACTCACCGGCAAAACCATAACTTTGGAAGTGGAATCATCA 1053837 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| || | || ||| ||||||||||| || || || || ||||| || Sbjct 1053838 GACACAATCGACAACGTCAAGTCGAAGATTCAAGATAAGGAGGGCATCCCTCCTGACCAG 1053897 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || || || || || || || || || | ||||| | ||||| ||| Sbjct 1053898 CAGCGCCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGCCGAACGCTCTCGGATTACAAT 1053957 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || || || || || || ||||| ||||| | ||| | || ||||| Sbjct 1053958 ATCCAGAAGGAGTCGACCTTGCACTTGGTGCTGCGTCTTCGTGGTGG 1054004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455811136000