Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq16 107 2e-18 seq18 98.7 9e-16 seq15 89.7 4e-13 >seq16 Length=1709166 Score = 107 bits (118), Expect = 2e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||| | |||| || ||||| || ||||||||||| ||| Sbjct 1053550 TACCACCACGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGG 1053491 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| |||||| || || |||||||| |||| ||||||||||| || |||| Sbjct 1053490 ACAGGGTGCGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAG 1053431 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| ||| || || || | |||| |||||| | ||| | Sbjct 1053430 GAATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCAA 1053371 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCA 118716 |||| | ||| | || || || |||| Sbjct 1053370 CCTCAAGGGTGATGGTCTTTCCCGTCA 1053344 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||| | || ||||| || || || |||||||| | || || || Sbjct 1053990 CAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCCGAGAGCGTTCGGCCGTC 1053931 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || | ||| || |||||| ||||||| |||||||| || ||||| ||||||||||| || Sbjct 1053930 TTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATC 1053871 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCG 118704 | ||| || || || | |||| ||||| | || | || || || | || | | Sbjct 1053870 TTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGATGAT-TCCACTTCCAAAGTTATGG 1053812 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||||| || || || || || |||||||| Sbjct 1053811 TTTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 1053778 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || ||||| |||||||| || | ||| || || |||||||| |||||| Sbjct 1053746 GTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCGTCTTCGAGCTGCTTTCCA 1053687 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || |||||||| || ||||| |||||||||||||| ||| || || Sbjct 1053686 GCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTG 1053627 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | || ||||| | ||| | || || || || || || Sbjct 1053626 ACGTTGTCGATGGTGTCGGAAGATTCAACCTCAAGGGTGATGGTCTTTCCAGTGAGCGTC 1053567 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 1053566 TTGACGAAGATCTGCAT 1053550 >seq18 Length=1930349 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||| || |||||| ||||| ||||| || |||| Sbjct 1554241 TTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATC 1554182 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 |||||||| || || || || |||||||||||||| || || || || | ||| Sbjct 1554181 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCG 1554122 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | |||||| | ||| ||||||| ||| | || ||||| || || || || || | Sbjct 1554121 ATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGAC--GA 1554064 Query 118731 ATCTGCATGGCTTATT 118746 | |||||| ||||| Sbjct 1554063 AGCTGCATCATTTATT 1554048 >seq15 Length=1704560 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| ||| || ||||| || || Sbjct 828574 CACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTC 828633 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||||| || |||||| |||| || |||||||| ||||| || |||||||||||||||| Sbjct 828634 CAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCTG 828692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830294253840