Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq16 131 1e-25 seq15 104 2e-17 seq18 82.4 5e-11 >seq16 Length=1709166 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||||| ||| || || || ||||| || ||||| || || Sbjct 1054004 CCACCACGAAGACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCCGAG 1053945 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| |||||||||||||| ||||| ||||| ||||||||||| || Sbjct 1053944 AGCGTTCGGCCGTCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGG 1053885 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | | | | || | || | ||||| || Sbjct 1053884 ATGCCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGATGATTCCACT 1053825 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || ||||||||||||||||| || || || ||||||||||| Sbjct 1053824 TCCAAAGTTATGGTTTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 1053778 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || || || ||||| ||| || || ||||||||||| || Sbjct 1053776 CCACCACGCAGACGGAGAACAAGATGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAG 1053717 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || || || || || ||||||||||| || Sbjct 1053716 AGAGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGA 1053657 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | |||| ||||| || Sbjct 1053656 ATGCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGATTCAACC 1053597 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || || ||||| || || || ||||||||||| Sbjct 1053596 TCAAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 1053550 >seq15 Length=1704560 Score = 104 bits (114), Expect = 2e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||| ||||| | || || ||||| ||||||||||||||| Sbjct 828557 CCGCCACGGAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 828616 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| ||||||||| ||||| || || |||||||||||| ||| Sbjct 828617 AGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGA 828676 Query 34283 ACGCTCTCCTTGTCGGC 34299 | || ||||||||| || Sbjct 828677 ATGCCCTCCTTGTCTGC 828693 >seq18 Length=1930349 Score = 82.4 bits (90), Expect = 5e-11 Identities = 132/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||| ||| ||| | || || | |||||| || || || || Sbjct 1554241 TTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATC 1554182 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || ||||| ||||| ||| | || ||||||||| ||||| ||| | | | | Sbjct 1554181 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCG 1554122 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 || | ||| |||| || || || | ||||| || ||||| ||||| || || || ||| Sbjct 1554121 ATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAG 1554062 Query 34382 ATCTGCATC 34390 ||||||| Sbjct 1554061 --CTGCATC 1554055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071921251200