Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq20 150 4e-31 >seq20 Length=2175025 Score = 150 bits (166), Expect = 4e-31 Identities = 433/657 (66%), Gaps = 17/657 (3%) Strand=Plus/Minus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || || | ||||| | ||||| | ||| | | ||| | ||||| || || ||| Sbjct 1766225 GCCATCGTCTACGACCGTGATTTCAACTACCAATACTTCGGGTTCAAGACCCTCGAGCGT 1766166 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 || ||||| |||| |||||||||||| | | ||||| || || ||| | ||||| Sbjct 1766165 TCCTATCTGCTCAGGATTGATGGCAAGGTGGCCGAACGGCCACAACAGATGATCATGCGT 1766106 Query 248911 GTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATG 248970 || |||||||| || ||| || ||||| || || | ||||| |||| | ||| Sbjct 1766105 GTCGCTGTCGGTATCCACGGCGAGGACATCGAAGCCGCCATTGAGACATACAACTACATG 1766046 Query 248971 AGTGAACGC-TGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAA 249029 |||| | | || || ||| | || |||||||||| ||| ||||| ||| Sbjct 1766045 TC-GAACAAGTACTTCACGCACGCCTCCCCTACGCTCTTCAGCGCTGGTACGCCGAACCC 1765987 Query 249030 TCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGA 249089 |||||| ||| ||||| || | | |||| | || ||| |||| ||||||||||| Sbjct 1765986 TCAGCTCGCCTCTTGCTTCCTCATCGACATGAAGGAGGACAGCATCGATGGCATTTATGA 1765927 Query 249090 CACGCTTAA-ACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCT 249148 ||| || || || || | | ||| || || ||| || || |||||||| ||| Sbjct 1765926 CACCCTCAAGACCTGCG-CTATGATCTCCAAGAACGCTGGTGGCATCGGTCTGAACGTTC 1765868 Query 249149 CCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGG--GGTCAGTGATGGTAT 249206 | ||||| || | |||||||||||| ||| || || || ||| ||||| | Sbjct 1765867 ACCGTATCCGTGCTACCGGTTCGTACATCGGAGGCACTAACGGCACATCA--AATGGTCT 1765810 Query 249207 CGTACCCCTCCTTCGATGCTTTGAGTCCA----CCGCCAGGTTCATCAACCAGGC--CGG 249260 || ||| | || || ||| | || |||| | ||| | ||| ||| | Sbjct 1765809 TGTGCCCATGCTCCGCGTCTTCAACAACACTGCCCGCTATGTTGACCAAGGTGGCAACAA 1765750 Query 249261 GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTT 249320 ||| | || | |||||||| || |||| |||||| || ||| | || ||| Sbjct 1765749 GCGTC---CCGGAGCTTTCGCCATCTACGTGGAGCCGTGGCATGCGGATGTGTTCTCGTT 1765693 Query 249321 CCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGG 249380 ||| ||| | | |||||| ||||||| ||| | | || ||||| || ||||||| Sbjct 1765692 CCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGTGATCTGTTCTACGC 1765633 Query 249381 CCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 ||||||| || |||||||||||||| || ||| || ||||| |||||||| Sbjct 1765632 CCTGTGGATCCCCGACTTGTTCATGAAGCGTGTCGAGCAGAACGGCACCTGGACGCT 1765576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766124847360