Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq16 105 5e-18 seq18 100 2e-16 seq15 87.8 1e-12 >seq16 Length=1709166 Score = 105 bits (116), Expect = 5e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || |||||| |||||||||||||||||||||| ||| |||| | || || ||||| Sbjct 1053524 TGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCAAGTTGC 1053465 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 ||||| || || |||| ||||| ||||| ||||| | |||||||||||| ||| || Sbjct 1053464 TTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTG 1053405 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | |||| | ||| ||||| | ||| || ||||| |||||| Sbjct 1053404 CTCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGGGTGATGGTCTTTCCCGTC 1053345 Query 45314 A 45314 | Sbjct 1053344 A 1053344 >seq18 Length=1930349 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 45141 TGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGG 45200 |||| ||||||| |||||||||||| |||| || | || || || || ||||||| Sbjct 1554249 TGCTGACCTTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTTTCCGG 1554190 Query 45201 CGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAA 45260 | || |||| ||||||||||| || || | |||||||||||| || || ||| | Sbjct 1554189 CAAAGATCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGA 1554130 Query 45261 CCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCT 45320 | | | | |||| | ||||||||| | ||| || ||||||||||| || |||| Sbjct 1554129 CGTTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCT 1554070 Query 45321 TCACAAAG 45328 | || ||| Sbjct 1554069 TGACGAAG 1554062 >seq15 Length=1704560 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| ||| ||| |||| ||||| || || || ||||| Sbjct 828592 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCGAA 828651 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC--CGCAAT 45249 |||| ||||| |||||||| || | ||||||||||| |||||| Sbjct 828652 GATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCTGCGCAAT 828698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075103700420