Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq11 138 1e-27 seq20 113 6e-20 >seq11 Length=1047007 Score = 138 bits (152), Expect = 1e-27 Identities = 326/487 (67%), Gaps = 4/487 (1%) Strand=Plus/Plus Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008 |||||||||||||| ||||| | || | | | | | || | |||||||||||||| Sbjct 148312 GATGCCAGATTACAAACGGCGATTTCGTCCGGAGCAGTGTACTCGATTATCTCAGTGCAG 148371 Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068 ||||| | || ||| || | || | ||| || || || |||||| |||||| Sbjct 148372 AGATTCGAGCTCTGGATGACGCCAAGGTTCTTTTGGTTGCTTTTGCGGTTACAGGCATCC 148431 Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128 || || || ||| | ||||| ||||| |||| || | || | ||| || ||| | | Sbjct 148432 TTGTAGAGCATGTACGGAGTGCCAGTCTCAACTTGGGCGTCCAGAATTGCACGCCATAGG 148491 Query 63129 ACTCGAGCCTTTATTATAGATTTGTAT-CTCCTTTCTCTTTCGTATAGAGTATACAATCG 63187 | |||| || | | || | |||||| | || ||| | |||| || Sbjct 148492 ATGTGAGCGGGAATGGTCC-TGCGTCCACGCCTTTCCTTCTCATATCGTTCGTACAG-CG 148549 Query 63188 T-TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACG 63246 | || || || | ||| |||||| || | || ||||| ||||| |||||||||| Sbjct 148550 TCTCAAAATCTTGTCCGTAAACATCAGGCAGCCCCGGGCATTCGTCCGGGCACATCAACG 148609 Query 63247 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 63306 ||| ||| ||| | || || || ||||| || || | ||| ||||| || || ||| Sbjct 148610 TCCAATCTTCGTTTTGCTCAACGCGCTTCATGAACAGGTTAGGGATCCAGAGTGCATTAA 148669 Query 63307 ATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63366 | ||||| | | | || ||| || || || |||||| ||| || ||||| || | Sbjct 148670 AAAGATCGCGGGCACGATTTTCTTCTTTGCCGTGATTCTTGCGAAGGTCTAGGAAAGCAA 148729 Query 63367 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63426 | ||| | ||||| || |||||||||| ||| | ||||||| ||||||||||| | Sbjct 148730 ACACATCCGCGTGCCAGGGCTCCAAGTATACGGCAAATGCTCCAGGGCGTTTGTTTCCCC 148789 Query 63427 CCTGATC 63433 | ||||| Sbjct 148790 CTTGATC 148796 >seq20 Length=2175025 Score = 113 bits (124), Expect = 6e-20 Identities = 397/616 (64%), Gaps = 8/616 (1%) Strand=Plus/Plus Query 63188 TTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGA 63247 |||||||||||| || |||||| | | | | ||| || || | || ||||||| || Sbjct 1765521 TTCGAACTCGTCACCATAAACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGCGT 1765580 Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 ||| |||| | || || || ||||| || | || || ||||| || || || Sbjct 1765581 CCAGGTGCCGTTCTGCTCGACACGCTTCATGAACAAGTCGGGGATCCACAGGGCGTAGAA 1765640 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | | ||||| || || ||||| | || |||||||||| | Sbjct 1765641 CAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACGAGAA 1765700 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | ||| | ||||||||| |||| ||| ||||| | | |||| || || ||||| || || Sbjct 1765701 CACATCCGCATGCCACGGCTCCACGTAGATGGCGAAAGCTCCGGGACGCTTGTTGCCACC 1765760 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 || || | || | || ||||| || | || | | ||| || | || ||| ||||| Sbjct 1765761 TTGGTCAACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACAAGACCATTTGA 1765820 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547 | | || || || || ||| || || | ||||| ||| || ||||| Sbjct 1765821 TGTGCCGTTAGTGCCTCCGATGTACGAACCGGTAGCACGGATACGGTGAACGTTCAGACC 1765880 Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTC 63607 || || || || | || ||||| | ||||| || | |||||||| ||||| || Sbjct 1765881 GATGCCACCAGCGTTCTTGGAGATCATAGCGCAGGTCTTGAGGGTGTCATAAATGCCATC 1765940 Query 63608 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG---AGTAGT 63664 ||||| || || |||||| | || | ||| ||| | ||| | | || Sbjct 1765941 GATGCTGTCCTCCTTCATGTCGATGAGGA---AGCAAGAGGCGAGCTGAGGGTTCGGCGT 1765997 Query 63665 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA-TTTTTCAGAAAGTAGATTGT 63723 || || | || | ||||| || |||||||| || | || ||| | |||| |||| Sbjct 1765998 ACCAGCGCTGAAGAGCGTAGGGGAGGCGTGCGTGAAGTACTTGTTCGACATGTAG-TTGT 1766056 Query 63724 ACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACA 63783 | |||||||| || | || || ||| || || || || ||||||||||| | || Sbjct 1766057 ATGTCTCAATGGCGGCTTCGATGTCCTCGCCGTGGATACCGACAGCGACACGCATGATCA 1766116 Query 63784 TGTGCTGAGGTCTTTC 63799 | || || || | ||| Sbjct 1766117 TCTGTTGTGGCCGTTC 1766132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817442545600