Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq11 147 3e-30 seq20 111 2e-19 >seq11 Length=1047007 Score = 147 bits (162), Expect = 3e-30 Identities = 328/487 (67%), Gaps = 4/487 (1%) Strand=Plus/Plus Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 65801 |||||||||||||||||||| | || | | | | | || | |||||||||||||| Sbjct 148312 GATGCCAGATTACAAACGGCGATTTCGTCCGGAGCAGTGTACTCGATTATCTCAGTGCAG 148371 Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861 ||||| | || |||| || | || | ||| || || || |||||| |||||| Sbjct 148372 AGATTCGAGCTCTGGATGACGCCAAGGTTCTTTTGGTTGCTTTTGCGGTTACAGGCATCC 148431 Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 65921 || || || ||| | ||||| ||||| |||| || | || | ||| || ||| | | Sbjct 148432 TTGTAGAGCATGTACGGAGTGCCAGTCTCAACTTGGGCGTCCAGAATTGCACGCCATAGG 148491 Query 65922 ACTCGAGCCTTTATTATAGATTTGTAT-CTCTTTTCTCTTTCGTATAGTGTATACAATCG 65980 | |||| || | | || | | |||| | || ||| || |||| || Sbjct 148492 ATGTGAGCGGGAATGGTCC-TGCGTCCACGCCTTTCCTTCTCATATCGTTCGTACAG-CG 148549 Query 65981 T-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACG 66039 | || || || | ||| |||||| || || || ||||| ||||| |||||||||| Sbjct 148550 TCTCAAAATCTTGTCCGTAAACATCAGGCAGCCCCGGGCATTCGTCCGGGCACATCAACG 148609 Query 66040 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 66099 ||| ||| ||| | || || || ||||| || || | ||| ||||| || || ||| Sbjct 148610 TCCAATCTTCGTTTTGCTCAACGCGCTTCATGAACAGGTTAGGGATCCAGAGTGCATTAA 148669 Query 66100 ATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 66159 | | ||| | || | || ||| || || || |||||| ||| || ||||| || | Sbjct 148670 AAAGATCGCGGGCACGATTTTCTTCTTTGCCGTGATTCTTGCGAAGGTCTAGGAAAGCAA 148729 Query 66160 TAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 66219 | ||| ||||| || |||||||||| ||| | ||||||| ||||||||||| | Sbjct 148730 ACACATCCGCGTGCCAGGGCTCCAAGTATACGGCAAATGCTCCAGGGCGTTTGTTTCCCC 148789 Query 66220 CCTGATC 66226 | ||||| Sbjct 148790 CTTGATC 148796 >seq20 Length=2175025 Score = 111 bits (122), Expect = 2e-19 Identities = 571/904 (63%), Gaps = 20/904 (2%) Strand=Plus/Plus Query 65981 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 66040 |||||||||||| || |||||| | | | ||||| || || | || ||||||| || Sbjct 1765521 TTCGAACTCGTCACCATAAACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGCGT 1765580 Query 66041 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 66100 ||| |||| | || || || ||||| || | || || ||||| || || || Sbjct 1765581 CCAGGTGCCGTTCTGCTCGACACGCTTCATGAACAAGTCGGGGATCCACAGGGCGTAGAA 1765640 Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 66160 | ||| | | | ||||| || || ||||| | || |||||||||| | Sbjct 1765641 CAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACGAGAA 1765700 Query 66161 AATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220 | ||| ||||||||| |||| ||| ||||| | | |||| || || ||||| || || Sbjct 1765701 CACATCCGCATGCCACGGCTCCACGTAGATGGCGAAAGCTCCGGGACGCTTGTTGCCACC 1765760 Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280 || || | || | || ||||| || | || | | ||| || | || |||||| || Sbjct 1765761 TTGGTCAACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACAAGACCATTTGA 1765820 Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACC 66340 ||| || || || || ||| || || | ||||| ||| || ||||| Sbjct 1765821 TGTGCCGTTAGTGCCTCCGATGTACGAACCGGTAGCACGGATACGGTGAACGTTCAGACC 1765880 Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 66400 || || || || | || ||||| | ||||| || | || ||||| ||||| || Sbjct 1765881 GATGCCACCAGCGTTCTTGGAGATCATAGCGCAGGTCTTGAGGGTGTCATAAATGCCATC 1765940 Query 66401 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---AGT 66457 || || || ||| |||||| | || | ||| ||| | ||| | | || Sbjct 1765941 GATGCTGTCCTCCTTCATGTCGATGAGGA---AGCAAGAGGCGAGCTGAGGGTTCGGCGT 1765997 Query 66458 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA-TTTTTCAGAAAGTAGATTGT 66516 || || | || | ||||| || |||||||| || | || ||| | |||| |||| Sbjct 1765998 ACCAGCGCTGAAGAGCGTAGGGGAGGCGTGCGTGAAGTACTTGTTCGACATGTAG-TTGT 1766056 Query 66517 ACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACA 66576 | |||||||| || | || || ||| || || || || ||||||||||| | || Sbjct 1766057 ATGTCTCAATGGCGGCTTCGATGTCCTCGCCGTGGATACCGACAGCGACACGCATGATCA 1766116 Query 66577 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 66636 | || || || | ||| | | |||| | || | | || ||||| || | | Sbjct 1766117 TCTGTTGTGGCCGTTCGGCCACCTTGCCATCAATCCTGAGCAGATAGGAACGCTCGAGGG 1766176 Query 66637 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 | || || || || || | ||| ||||| || || ||||| | || |||||||||| Sbjct 1766177 TCTTGAACCCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGACGATGGCCGAGTTGAG 1766234 Query 66695 TTTATCCTTATATTTGTTAACTACATCCATGGTAATACT----TGAAATAATCGGAGAAT 66750 | || ||| || | || ||| ||| || |||||| || || | Sbjct 1766235 CTCTTCGCTATGCTTCATGACAGTATC----GTACGTCTCTTGTGAAATCATGGGGGCGG 1766290 Query 66751 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 66810 || ||| || || |||||||| | ||| | ||| || || || ||| | | Sbjct 1766291 CCTTATTATTCTTGGGGTTGACATAATAGAAAAGATCTGAAATGACGGCAGAGAATTGCT 1766350 Query 66811 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCG 66870 | || || | ||||| || || || || ||||| | ||| || | ||||| || || | Sbjct 1766351 TCTTGGTCTGCTTGTGGAGGTTGGAGACTGCTATACGAGCCGCGAGGATGGCGTAGTCTG 1766410 Query 66871 GATG 66874 |||| Sbjct 1766411 GATG 1766414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172635456800