Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq20 138 2e-27 seq11 136 6e-27 >seq20 Length=2175025 Score = 138 bits (152), Expect = 2e-27 Identities = 466/720 (65%), Gaps = 12/720 (2%) Strand=Plus/Plus Query 79860 TTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGA 79919 |||||||||||| || |||||||| | | ||||| || |||| || ||||||| || Sbjct 1765521 TTCGAACTCGTCACCATAAACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGCGT 1765580 Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979 ||| || | | || || || ||||| || | || || ||||| || || || Sbjct 1765581 CCAGGTGCCGTTCTGCTCGACACGCTTCATGAACAAGTCGGGGATCCACAGGGCGTAGAA 1765640 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 ||||| | | | |||||| || || ||||| | || |||||||||| | Sbjct 1765641 CAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACGAGAA 1765700 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 | ||| | ||||||||| |||| ||| ||||| | | |||| || || ||||| || || Sbjct 1765701 CACATCCGCATGCCACGGCTCCACGTAGATGGCGAAAGCTCCGGGACGCTTGTTGCCACC 1765760 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 || || | || | || ||||| || | || | | ||| || | || |||||| || Sbjct 1765761 TTGGTCAACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACAAGACCATTTGA 1765820 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 80219 ||| || || || || ||| || || | ||||| ||| || ||||| Sbjct 1765821 TGTGCCGTTAGTGCCTCCGATGTACGAACCGGTAGCACGGATACGGTGAACGTTCAGACC 1765880 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 || || || || | || ||||| | ||||| || | || ||||| ||||| || Sbjct 1765881 GATGCCACCAGCGTTCTTGGAGATCATAGCGCAGGTCTTGAGGGTGTCATAAATGCCATC 1765940 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---AGT 80336 ||||| || || |||||| | || | ||| ||| | ||| | | || Sbjct 1765941 GATGCTGTCCTCCTTCATGTCGATGAGGA---AGCAAGAGGCGAGCTGAGGGTTCGGCGT 1765997 Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGT 80395 || || | || | ||||| || |||||||| || | || | |||| |||| |||| Sbjct 1765998 ACCAGCGCTGAAGAGCGTAGGGGAGGCGTGCGTGAAGTACTTGTTCGACATGTAG-TTGT 1766056 Query 80396 ACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACA 80455 | |||||||| || | ||| || ||| || || || || ||||||||||| | || Sbjct 1766057 ATGTCTCAATGGCGGCTTCGATGTCCTCGCCGTGGATACCGACAGCGACACGCATGATCA 1766116 Query 80456 TGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAG 80515 | || || || | ||| | | |||| || || | | || || || || | | Sbjct 1766117 TCTGTTGTGGCCGTTCGGCCACCTTGCCATCAATCCTGAGCAGATAGGAACGCTCGAGGG 1766176 Query 80516 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 | || || || || || | ||| ||||| || || ||||| | || |||||||||| Sbjct 1766177 TCTTGAACCCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGACGATGGCCGAGTTGAG 1766234 >seq11 Length=1047007 Score = 136 bits (150), Expect = 6e-27 Identities = 326/489 (67%), Gaps = 8/489 (2%) Strand=Plus/Plus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 |||||||||||||||||||| | || | | | | | || | ||||| ||||||||| Sbjct 148312 GATGCCAGATTACAAACGGCGATTTCGTCCGGAGCAGTGTACTCGATTATCTCAGTGCAG 148371 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 || || | || ||| || | || | ||| || || || |||||| |||||| Sbjct 148372 AGATTCGAGCTCTGGATGACGCCAAGGTTCTTTTGGTTGCTTTTGCGGTTACAGGCATCC 148431 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 || || || ||| ||||||| ||||| |||| || | || | ||| || ||| | | Sbjct 148432 TTGTAGAGCATGTACGGAGTGCCAGTCTCAACTTGGGCGTCCAGAATTGCACGCCATAGG 148491 Query 79801 ACTCGAGCCTTTATTATAGACTTGTATCT---CTTTTCTCTTTCGTATTGTGTATATAAT 79857 | |||| || | | || || | |||| | || ||| || || | Sbjct 148492 ATGTGAGCGGGAATGGT---CCTGCGTCCACGCCTTTCCTTCTCATATCGTTCGTACAG- 148547 Query 79858 CGT-TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAA 79916 ||| || || || | ||| ||||||| | || || |||||||| || |||||||| Sbjct 148548 CGTCTCAAAATCTTGTCCGTAAACATCAGGCAGCCCCGGGCATTCGTCCGGGCACATCAA 148607 Query 79917 CGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 79976 || ||| ||| | | | || || || ||||| || || | ||| ||||| || || | Sbjct 148608 CGTCCAATCTTCGTTTTGCTCAACGCGCTTCATGAACAGGTTAGGGATCCAGAGTGCATT 148667 Query 79977 AAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 80036 ||| ||||| | || | || || || || || |||||| ||| || ||||| || Sbjct 148668 AAAAAGATCGCGGGCACGATTTTCTTCTTTGCCGTGATTCTTGCGAAGGTCTAGGAAAGC 148727 Query 80037 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCC 80096 | | ||| | ||||| || |||||||||| ||| | |||| || ||||||||||| Sbjct 148728 AAACACATCCGCGTGCCAGGGCTCCAAGTATACGGCAAATGCTCCAGGGCGTTTGTTTCC 148787 Query 80097 TCCCTGATC 80105 || ||||| Sbjct 148788 CCCTTGATC 148796 Score = 91.5 bits (100), Expect = 2e-13 Identities = 153/221 (69%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| ||| || || || || ||||| |||||||| | || || |||||||| Sbjct 556579 AACAGCAAGCAGGCAAAGTCAGTGTGCATGCCCTCGTCACGCGAGATGAGCTCGTTGGAG 556638 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || | ||| ||||||||||| || ||||| || || | ||||| || || Sbjct 556639 AAAGTGAGACCAGCCATGAGGCCACGCTTCTTGAGCCAGAAGATTGCTGCAAAGGAGCCG 556698 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 |||||||| || ||||| ||||| || |||| | || || | ||| | || Sbjct 556699 CTGAAGAAGATACCCTCTACGGCGGCGAATGCAATCAATCGGCAAGCAAACGTGGAGTTG 556758 Query 50131 TCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTT 50168 |||| ||||| ||||||| || ||||||||||| Sbjct 556759 TCATCCGAGATCCATCGGAGAGCCCAGTCTGCCTTCTTTTT 556799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268620432800