Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq20 129 8e-25 seq11 111 2e-19 >seq20 Length=2175025 Score = 129 bits (142), Expect = 8e-25 Identities = 572/900 (64%), Gaps = 12/900 (1%) Strand=Plus/Plus Query 71943 TTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002 |||||||||||| || || ||| | | | ||||| || || || || ||||||| | Sbjct 1765521 TTCGAACTCGTCACCATAAACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGCGT 1765580 Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 72062 ||| || | | | || || ||||| || | || || ||||| || || || Sbjct 1765581 CCAGGTGCCGTTCTGCTCGACACGCTTCATGAACAAGTCGGGGATCCACAGGGCGTAGAA 1765640 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122 ||||| | | | |||||| || || ||||| | || |||||||||| | Sbjct 1765641 CAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACGAGAA 1765700 Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 | ||| | ||||||||| |||| ||| ||||| | | |||| || || ||||| || || Sbjct 1765701 CACATCCGCATGCCACGGCTCCACGTAGATGGCGAAAGCTCCGGGACGCTTGTTGCCACC 1765760 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 || || | || | || ||||| || | || | | ||| || | || |||||| || Sbjct 1765761 TTGGTCAACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACAAGACCATTTGA 1765820 Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACC 72302 || || || || || ||| || || | ||||| ||| | || ||||| Sbjct 1765821 TGTGCCGTTAGTGCCTCCGATGTACGAACCGGTAGCACGGATACGGTGAACGTTCAGACC 1765880 Query 72303 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 72362 || || || || | || ||||| | ||||| || | || ||||| ||||| || Sbjct 1765881 GATGCCACCAGCGTTCTTGGAGATCATAGCGCAGGTCTTGAGGGTGTCATAAATGCCATC 1765940 Query 72363 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---AGT 72419 || || || ||| |||||| | || | ||| ||| | ||| | | || Sbjct 1765941 GATGCTGTCCTCCTTCATGTCGATGAGGA---AGCAAGAGGCGAGCTGAGGGTTCGGCGT 1765997 Query 72420 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGT 72478 || || | || | ||||| || |||||||| || | || | |||| |||| |||| Sbjct 1765998 ACCAGCGCTGAAGAGCGTAGGGGAGGCGTGCGTGAAGTACTTGTTCGACATGTAG-TTGT 1766056 Query 72479 ACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACA 72538 | |||||||| || | ||| || ||| || || || || ||||||||||| | || Sbjct 1766057 ATGTCTCAATGGCGGCTTCGATGTCCTCGCCGTGGATACCGACAGCGACACGCATGATCA 1766116 Query 72539 TATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAG 72598 | || || || | ||| | | |||| || || | | || ||||| || | | Sbjct 1766117 TCTGTTGTGGCCGTTCGGCCACCTTGCCATCAATCCTGAGCAGATAGGAACGCTCGAGGG 1766176 Query 72599 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 | || || || || || | ||| ||||| || || ||||| | || |||| ||||| Sbjct 1766177 TCTTGAACCCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGACGATGGCCGAGTTGAG 1766234 Query 72657 TTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTT 72716 | || ||| || | || |||| || |||||| || || | || Sbjct 1766235 CTCTTCGCTATGCTTCATGACAGTATCGTACGTCTCTTGTGAAATCATGGGGGCGGCCTT 1766294 Query 72717 CCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 72776 ||| || || || ||||| | ||| | ||| || || || ||| | || || Sbjct 1766295 ATTATTCTTGGGGTTGACATAATAGAAAAGATCTGAAATGACGGCAGAGAATTGCTTCTT 1766354 Query 72777 tGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 || | |||||| || || || || ||||| | || || || ||||| || |||||||| Sbjct 1766355 GGTCTGCTTGTGGAGGTTGGAGACTGCTATACGAGCCGCGAGGATGGCGTAGTCTGGATG 1766414 Score = 89.7 bits (98), Expect = 7e-13 Identities = 297/459 (65%), Gaps = 5/459 (1%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || || || || |||| || || || | || || || ||||||||||| ||||| ||| Sbjct 1764370 GTGAATTGGATAGGAGCAGAGGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTTTTGAGA 1764429 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || || |||||||| ||| ||||| ||| | ||| | | || || ||| Sbjct 1764430 CCAAGCTTCCATCCGGCAAAGTGCATCGACGTGATCTTGCCCATGGTTGGCTCCTTCATG 1764489 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 || || || | |||||| |||||||||||| || || | ||| |||||||| | | | Sbjct 1764490 TGGATGTTGAGCGACTGCGATTGATCGATGAAAGCACCACGGTCGGCAGCCATCTGCACG 1764549 Query 70981 ATC-GTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039 ||| | | | | | || ||||||| ||| || || | | ||| | || || || | Sbjct 1764550 ATCTGGCGCTGGCTG-ATCTCCCAAACAGTCTTGTACAATGCCTTGAGGTCATCGGGGAT 1764608 Query 71040 GTTTGTATT---CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096 ||| | | | ||| |||||||||| || || || || | || || || | || Sbjct 1764609 GTTAGGAATGCGCTGGATGGATCCACTGTCGGCGATGATGCGGTTCTTCATGTTGTCGGA 1764668 Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156 ||| | | ||| | | | | || | ||| || || ||||| || || || Sbjct 1764669 CCACAGGCCACGGTCGACAAGATCCTTGAGCAACCAAGGGTTGACCACTTGGAACTCGCC 1764728 Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216 | ||| || | || | ||| || ||| || || || || | ||||||| ||| Sbjct 1764729 TGCCAAGACACGGCGCGAGTAGATGTTAGAAGTGTAAGGCTCGAAGCACTCATTGAATCC 1764788 Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 71255 || || || | || || |||||||||||||| || || Sbjct 1764789 CATGATCTGCGAGGTAGAAGCAGTCGGCATAGGGGCAAC 1764827 >seq11 Length=1047007 Score = 111 bits (122), Expect = 2e-19 Identities = 320/487 (66%), Gaps = 4/487 (1%) Strand=Plus/Plus Query 71704 GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAA 71763 |||||||||||||||||||| | || | | | | | || | || || |||||||| Sbjct 148312 GATGCCAGATTACAAACGGCGATTTCGTCCGGAGCAGTGTACTCGATTATCTCAGTGCAG 148371 Query 71764 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 71823 ||||| | || |||| || | || | ||| || || || |||||| |||||| Sbjct 148372 AGATTCGAGCTCTGGATGACGCCAAGGTTCTTTTGGTTGCTTTTGCGGTTACAGGCATCC 148431 Query 71824 TTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 71883 || || || || ||||||| ||||| |||| || | || | ||| || ||| | | Sbjct 148432 TTGTAGAGCATGTACGGAGTGCCAGTCTCAACTTGGGCGTCCAGAATTGCACGCCATAGG 148491 Query 71884 ACTCGAGCCTTTATTATATT-CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCG 71942 | |||| || | | | | | |||| || | || ||| || || | || Sbjct 148492 ATGTGAGCGGGAATGGTCCTGCGTCCACGCCTTTCCT-TCTCATATCGTTCGTACAG-CG 148549 Query 71943 T-TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATG 72001 | || || || | ||| || ||| | || || ||||| | ||| |||||||| | Sbjct 148550 TCTCAAAATCTTGTCCGTAAACATCAGGCAGCCCCGGGCATTCGTCCGGGCACATCAACG 148609 Query 72002 ACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 72061 ||| ||| | | | | || || ||||| || || | ||| ||||| || || ||| Sbjct 148610 TCCAATCTTCGTTTTGCTCAACGCGCTTCATGAACAGGTTAGGGATCCAGAGTGCATTAA 148669 Query 72062 ATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 72121 | ||||| | || | || || || || || |||||| ||| || ||||| || | Sbjct 148670 AAAGATCGCGGGCACGATTTTCTTCTTTGCCGTGATTCTTGCGAAGGTCTAGGAAAGCAA 148729 Query 72122 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTC 72181 | ||| | ||||| || |||||||||| ||| | |||| || ||||||||||| | Sbjct 148730 ACACATCCGCGTGCCAGGGCTCCAAGTATACGGCAAATGCTCCAGGGCGTTTGTTTCCCC 148789 Query 72182 CCTGATC 72188 | ||||| Sbjct 148790 CTTGATC 148796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139032215200