Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq20 149 9e-31 seq11 147 3e-30 seq8 102 1e-16 >seq20 Length=2175025 Score = 149 bits (164), Expect = 9e-31 Identities = 620/953 (65%), Gaps = 48/953 (5%) Strand=Plus/Minus Query 96403 ACTCGGCCATTGTAGACGATCGCGATTTTCAATCTTTGACCTAT--TTTGCATACAAGAC 96460 |||||||||| || |||| || ||||| ||| || ||| || || | | |||||| Sbjct 1766230 ACTCGGCCATCGTCTACGACCGTGATTT-CAA-CT---ACCAATACTTCGGGTTCAAGAC 1766176 Query 96461 GCTAGAGCGTACCTATCTGATAAAGCTGGCCGACGGTAAGATTTGTGAACGAGTGCAGCA 96520 || |||||| |||||||| | | | | | | || ||| | ||||| || || Sbjct 1766175 CCTCGAGCGTTCCTATCTGCTCAGGATTG---ATGGCAAGGTGGCCGAACGGCCACAACA 1766119 Query 96521 CATGTACATGAGGACCGCGCTCGGTATTCACGGTCGGGATATTGAATCGGTAATCGAAAC 96580 ||| |||| | ||| ||||||| ||||| ||| || ||| | | || || || Sbjct 1766118 GATGATCATGCGTGTCGCTGTCGGTATCCACGGCGAGGACATCGAAGCCGCCATTGAGAC 1766059 Query 96581 GTACAATCTAC-TCTCGAACCGCTACTATGTACATTCGACGCCTACTCTGTGTCAT-GCG 96638 ||||| |||| | |||||| |||| || | | ||||| || | ||| || Sbjct 1766058 ATACAA-CTACATGTCGAACAAGTACTTCACGCACGCCTCCCCTACGCTCT-TCAGCGCT 1766001 Query 96639 GCAACG---AATCGTTCCAACTATGCCTCTTGCTATCTGCTCGAACTCAAAGAGGACAGC 96695 | ||| || | | || || |||||||||| || |||| | || ||||||||| Sbjct 1766000 GGTACGCCGAACCCT--CAGCTC-GCCTCTTGCTTCCTCATCGACATGAAGGAGGACAGC 1765944 Query 96696 ATCGGTGGCGTTATGGACACGCTAAAGGACGCGGCCACCATTTCAAAACACTGTGGCGGT 96755 |||| |||| || ||||| || ||| | || | || || || || ||| || Sbjct 1765943 ATCGATGGCATTTATGACACCCTCAAGACCTGCGCTATGATCTCCAAGAACGCTGGTGGC 1765884 Query 96756 GTAGGTTTGCATGTGCACAAGTTGCGCTGTAAAAACTCTAC-GATTCATTCA-------- 96806 | ||| || | || ||| | || || |||| | ||| | || Sbjct 1765883 ATCGGTCTGAACGTTCACCGTATCCG-TG--------CTACCGGTTCGTACATCGGAGGC 1765833 Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||||| | | ||| || ||||| |||||| | | | ||| || || | || Sbjct 1765832 ACTAACGGCACATCAAATGGTCTTGTGCCCATGCTCCGCGTCTTCAACAACACTGCC-CG 1765774 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 || ||| || || ||||| || || || || ||| | ||| ||||| |||| || || Sbjct 1765773 CTATGTTGACCAAGGTGGCAACAAGCGTCCCGGAGCTTTCGCCATCTACGTGGAGCCGTG 1765714 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 ||| ||||| || || || |||| | | || ||| ||| || |||| || Sbjct 1765713 GCATGCGGATGTGTTCTCGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTCCG 1765654 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 || | || |||| || || || ||| | || || |||||||||||||| ||| | | Sbjct 1765653 CGCTCGTGATCTGTTCTACGCCCTGTGGATCCCCGACTTGTTCATGAAGCGTGTCGAGCA 1765594 Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105 ||| ||||| || ||||||||| || || || ||||| ||||| | || Sbjct 1765593 GAACGGCACCTGGACGCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGATGTTTATGG 1765534 Query 97106 CGAAGAGTTTGAGGCCAAGTACACG-GC-CTACGAGCAAGAGGGCCGATA-CGTGAGACG 97162 || ||||| || | || | | | || ||||||| | || || || ||||| || Sbjct 1765533 TGACGAGTTCGAAG--AACTCTATGAGCGCTACGAGAAGGAAGGTCGCGGTCGTGACACC 1765476 Query 97163 AGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTC 97221 | || ||| | |||| |||||| | |||||| | ||||||| ||||| || | | Sbjct 1765475 ATCCG-TGCTC-AGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGTAACC 1765418 Query 97222 CGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCA 97281 | | ||| |||||||||||| | |||||||| |||||||| || | || || Sbjct 1765417 CCTTCATGCTCTACAAGGATGCTTGCAATCGCAAGAGCAACCAGAAGAACCTCGGTGTCA 1765358 Query 97282 TCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 || |||||||||| ||||| || ||||| |||||| | ||||||| ||| Sbjct 1765357 TCCGCAGCTCCAATCTCTGCACAGAGATTGTCGAGTACACTGCTCCGGATGAG 1765305 >seq11 Length=1047007 Score = 147 bits (162), Expect = 3e-30 Identities = 331/494 (67%), Gaps = 19/494 (4%) Strand=Plus/Minus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || ||||| | |||| | || |||||| || ||||| || ||| || | || Sbjct 556796 AAGAAGGCAGACTGGGCTCTCCGATGGATCTCGGATGACAACTCCACGTTTGCTTGCCGA 556737 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || | |||||||||||||||||||| |||||||| || ||||| || ||||| Sbjct 556736 TTGATTGCATTCGCCGCCGTAGAGGGTATCTTCTTCAGCGGCTCCTTTGCAGCAATCTTC 556677 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 |||||||||||||| || |||||| | || || || | |||||| | || || || Sbjct 556676 TGGCTCAAGAAGCGTGGCCTCATGGCTGGTCTCACTTTCTCCAACGAGCTCATCTCGCGT 556617 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGA 125605 ||||||||| | ||| |||||||||| | ||||| ||||| || | | Sbjct 556616 GACGAGGGCATGCACACTGACTTTGCCTGCTTGCTGTTCTCGCACCT----------CAA 556567 Query 125606 GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACA 125665 | || || | | || |||| |||| | || || ||||| | ||| || || Sbjct 556566 GAACAAGCCCGACCAGCAATTGGTCCAAGACATCATCACTGAAGCCGTCACGATTGAGCA 556507 Query 125666 AGAGTTTCTAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGCTAATGT 125724 |||||| || || || | || || || |||| || |||||||||||| || || ||| Sbjct 556506 AGAGTTCCTGACGGACGCTCTCCCTGT-AGCACTGCTTGGCATGAACTCGAATCTCATGA 556448 Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC---CGCAAGA 125781 | ||||||| ||||| ||||| || ||||| || | | | ||| | | | Sbjct 556447 GACAGTACATTGAGTTCGTGGCTGACCGTCTCCT---CCTGGCACTCGGCAATCAAAGGT 556391 Query 125782 TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCA 125841 ||||||| | ||||| || || || ||| | ||| || ||| || ||||| | Sbjct 556390 ACTACAACGTTAGCAATCCGTTCGACTTTATGGAGAACATCTCGCTATCAGGCAAGACGA 556331 Query 125842 ACTTTTTCGAGAAG 125855 |||| ||||||||| Sbjct 556330 ACTTCTTCGAGAAG 556317 Score = 141 bits (156), Expect = 1e-28 Identities = 363/543 (67%), Gaps = 16/543 (3%) Strand=Plus/Minus Query 96824 TGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAGGGCG 96882 |||||| || |||||||| | || | ||| | || || | || || | | || || | Sbjct 148845 TGGCCTGGTCCCAATGCTTCGTATCTTCAACGACACTG-CTCGTTATGCTGATCAAGGGG 148787 Query 96883 GCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTG 96942 | || ||||| || || || | ||||| |||||||| || ||||||||||| || |||| Sbjct 148786 GAAACAAACGCCCTGGAGCATTTGCCGTATACTTGGAGCCCTGGCACGCGGATGTGTTTG 148727 Query 96943 ACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTT 97002 || | || | ||||| || ||| ||||| || ||| | || | ||| Sbjct 148726 CTTTCCTAGACCTTCGCAAGAATCACGGCAAAGAAGAAAATCGTGCCCGCGATCTTTTTA 148667 Query 97003 ATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT----CAACGACGGTGGCTACTGG 97058 ||||||||||| | || | |||||||||||||||| ||| ||| | | ||| Sbjct 148666 ATGCACTCTGGATCCCTAACCTGTTCATGAAGCGCGTTGAGCAAA-ACGAAG---ATTGG 148611 Query 97059 AGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAG 97118 | | |||||||| ||| | || || ||| | ||| | || |||| |||||| Sbjct 148610 ACGTTGATGTGCCCGGACGAATGCCCGGGGCTGCCTGATGTTTACGGACAAGATTTTGAG 148551 Query 97119 GCCAAGTAC--ACGGCCTACGAGCAAGAGGGCCGAT-ACGTGAGACGAGTCGATGCACGA 97175 | |||| ||| || ||| | || | || ||| ||| | || || | Sbjct 148550 ACGCTGTACGAACGA--TATGAGAAGGAAAGGCGTGGACGCAGGACCATTCCC-GCTCAC 148494 Query 97176 GAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTAC 97235 || ||| || || || || || || |||||||| ||||||||||| |||||| Sbjct 148493 ATCCTATGGCGTGCAATTCTGGACGCCCAAGTTGAGACTGGCACTCCGTACATGCTCTAC 148434 Query 97236 AAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAAT 97295 |||||| || || ||||| ||||||||| || | ||| |||| || |||| ||| Sbjct 148433 AAGGATGCCTGTAACCGCAAAAGCAACCAAAAGAACCTTGGCGTCATCCAGAGCTCGAAT 148374 Query 97296 CTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCA 97355 || ||||| || || | |||||| | |||||||||| | || ||||| ||||||| Sbjct 148373 CTCTGCACTGAGATAATCGAGTACACTGCTCCGGACGAAATCGCCGTTTGTAATCTGGCA 148314 Query 97356 TCG 97358 ||| Sbjct 148313 TCG 148311 Score = 138 bits (152), Expect = 2e-27 Identities = 203/282 (72%), Gaps = 4/282 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||||| || ||||||| || ||| |||||||| Sbjct 557197 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACGGCAGAGGAGATCGATCTG 557138 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | ||| | | || ||||| || || || Sbjct 557137 TCGAAGGATCTCCACGACTGGAACAAGCGTCTCAACGATGACGAGCGGTTCTTCATCTCC 557078 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | |||||||| |||| ||| ||||| ||||||||||| || || || || || Sbjct 557077 CACGTCCTCGCCTTCTTCGCCGCCTCGGATGGCATCGTCAACGAAAACCTAGTCGA-GCG 557019 Query 125198 ATTCTC-TCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||||| || ||| | || ||||||| ||||| ||||| ||||| ||||||| Sbjct 557018 CTTCTCATCCGAAGTACA-GATCCCAGAGGCCCGATGCTTCTACGGCTTCCAGATCATGA 556960 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298 | |||||| | || ||||| | |||||| || ||||||| Sbjct 556959 TGGAGAACATCCATTCGGAGACGTACTCGCTGCTCATTGACA 556918 >seq8 Length=950700 Score = 102 bits (112), Expect = 1e-16 Identities = 160/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 |||||||| || ||||| ||||| || |||||| | || | || || | |||| ||| Sbjct 517574 GGCGATCTTGGACCAGTATACGGTTTTCAGTGGCGACATTTCGGAGCCGAATATGAGGAC 517515 Query 70127 TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATT-GCAGACAATCATTGACACTCT 70185 ||| | || |||||| | || | || || || || | || || |||| ||| || Sbjct 517514 TGCCATACTGACTATACCGGCAAAGGAGTGGACCAGCTCGCGGAGG-TCATACACAAGCT 517456 Query 70186 CAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCA 70245 |||| |||||| || |||||||| | | | ||||||||||||||||| || | Sbjct 517455 GAAGAACAATCCCTACGACCGGAGGATCATCCTCGCCGCATGGAATCCTGCAGATCTGAA 517396 Query 70246 CCAAATGGCACTACCACCGTGTCA-CTGTTTGGCTCAGTTTTAC 70288 ||||||| || ||||||||||| ||||| ||||| || ||| Sbjct 517395 GAAAATGGCGCTTCCACCGTGTCATATGTTT-GCTCAATTCTAC 517353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059014735200