Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq16 152 1e-31 >seq16 Length=1709166 Score = 152 bits (168), Expect = 1e-31 Identities = 163/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| || || ||||| || || || || |||||||| ||||||| |||||| Sbjct 1053761 AGAACAAGATGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCGTCT 1053702 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || ||||||||||| || || | ||| || |||||||| || || || || ||| Sbjct 1053701 TCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 1053642 Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||| ||||| || || || || | ||| ||| || ||| ||||| || || || || Sbjct 1053641 TGAATC-TTGCTCTTGACGTTGTCGATGGTGTCGGAAGATTCAACCTCAAGGGTGATGGT 1053583 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || || || |||||||| Sbjct 1053582 CTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 1053550 Score = 120 bits (132), Expect = 7e-22 Identities = 145/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || |||||||| || ||||| || || || | ||| || Sbjct 1053533 AGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCC 1053474 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| ||||||||||| || || | ||| || |||||||| || || || || ||| Sbjct 1053473 TCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 1053414 Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||| ||||| || ||||| || | ||| ||| || || ||||| || || || || Sbjct 1053413 TGAATC-TTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGGGTGATGGT 1053355 Query 104527 CTTACCAGTAAGTGT 104541 ||| || || | ||| Sbjct 1053354 CTTTCCCGTCACTGT 1053340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398104954160