Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq20 158 2e-34 seq12 109 9e-20 >seq20 Length=2175025 Score = 158 bits (174), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| |||||| || |||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct 21620 AGAT-TCTTCGCGACAACATCCAGGGTATCACCAAGCCCGCGATCCGCCGTCTCGCTCGT 21678 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 |||||||| ||||||||| |||| | || |||| || |||| |||| ||| | ||| Sbjct 21679 CGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAGGAGACCCGTGGTGTCCTCAAG 21738 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 | ||||||| || || |||| ||||| || ||| || |||||||| || || ||| Sbjct 21739 ACCTTCCTCGAGGGTGTCATCCGCGATGCCGTCACCTACACTGAGCACGCCAAGCGCAAG 21798 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 || |||||||| | || | ||||| || | || | |||||||| Sbjct 21799 ACCGTCACCTCGCTTGACGTTGTCTACGCTCTCAAGAGGCAAGGCCG 21845 >seq12 Length=1130902 Score = 109 bits (120), Expect = 9e-20 Identities = 87/102 (85%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| |||| Sbjct 716103 CGCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCTA 716161 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||||||||| ||||||||||| || ||||||||| | |||| Sbjct 716162 TCCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 716203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075181713860