Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq16 114 1e-20 seq15 98.7 9e-16 >seq16 Length=1709166 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||||||||| || || | |||||||||||| || || |||||||| Sbjct 1054005 GCCACCACGAAGACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCCGA 1053946 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||| || | ||||||||| ||| |||| | ||||||||||| ||||| Sbjct 1053945 GAGCGTTCGGCCGTCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGG 1053886 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || || ||| ||||| | || | || || | || || | Sbjct 1053885 GATGCCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGATGATTCCAC 1053826 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||| ||||| || || || ||||| |||||||| Sbjct 1053825 TTCCAAAGTTATGGTTTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 1053778 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | ||| | || |||||||| ||||||||||| ||| | Sbjct 1053548 CCACCACGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAC 1053489 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| || ||||| || || |||| | |||||||||||| ||||| Sbjct 1053488 AGGGTGCGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 1053429 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 1053428 ATGCCCTCCTTGTC 1053415 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | || || |||||||| |||||||| || Sbjct 1053776 CCACCACGCAGACGGAGAACAAGATGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAG 1053717 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || |||||||| || || |||| | ||||||||||| ||||| Sbjct 1053716 AGAGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGA 1053657 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || |||| || || | Sbjct 1053656 ATGCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGATTCAACC 1053597 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || ||||| |||||||| Sbjct 1053596 TCAAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 1053550 >seq15 Length=1704560 Score = 98.7 bits (108), Expect = 9e-16 Identities = 105/138 (76%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 131007 GCCACCGC---GCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC 131063 |||||||| | | ||| ||||| | || | |||||||||||| || |||||||| || Sbjct 828553 GCCACCGCCACGGAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 828612 Query 131064 GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGG 131123 | || |||||| ||| || ||||||||||| ||| |||| | ||||||||||| || Sbjct 828613 GGACAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGG 828672 Query 131124 AGGGATTCCTTCTTTGTC 131141 || || || || ||||| Sbjct 828673 GGGAATGCCCTCCTTGTC 828690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012681996800