Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq11 161 1e-34 seq20 125 9e-24 >seq11 Length=1047007 Score = 161 bits (178), Expect = 1e-34 Identities = 331/487 (68%), Gaps = 4/487 (1%) Strand=Plus/Plus Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 |||||||||||||||||||| | || | | | | | || | |||||||||||||| Sbjct 148312 GATGCCAGATTACAAACGGCGATTTCGTCCGGAGCAGTGTACTCGATTATCTCAGTGCAG 148371 Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872 ||||| | || |||| || | || | ||| || || || |||||| |||||| Sbjct 148372 AGATTCGAGCTCTGGATGACGCCAAGGTTCTTTTGGTTGCTTTTGCGGTTACAGGCATCC 148431 Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932 || || || ||| | ||||| ||||| |||| || | || | ||| || ||| | | Sbjct 148432 TTGTAGAGCATGTACGGAGTGCCAGTCTCAACTTGGGCGTCCAGAATTGCACGCCATAGG 148491 Query 62933 ACTCGAGCCTTTATTATAGATTTGTAT-CTCTTTTCTCTTTCGTATAGTGTATACAATCG 62991 | |||| || | | || | | |||| | || ||| || |||| || Sbjct 148492 ATGTGAGCGGGAATGGTCC-TGCGTCCACGCCTTTCCTTCTCATATCGTTCGTACAG-CG 148549 Query 62992 T-TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACG 63050 | || || || | ||| |||||| ||| || || ||||| ||||| |||||||||| Sbjct 148550 TCTCAAAATCTTGTCCGTAAACATCAGGCAGCCCCGGGCATTCGTCCGGGCACATCAACG 148609 Query 63051 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 63110 ||| ||| ||| | || || || ||||| || || | ||| ||||| || || ||| Sbjct 148610 TCCAATCTTCGTTTTGCTCAACGCGCTTCATGAACAGGTTAGGGATCCAGAGTGCATTAA 148669 Query 63111 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63170 | ||||| | || | || ||| || || || |||||| ||| || ||||| || | Sbjct 148670 AAAGATCGCGGGCACGATTTTCTTCTTTGCCGTGATTCTTGCGAAGGTCTAGGAAAGCAA 148729 Query 63171 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63230 | ||| | ||||| || |||||||||| ||| | ||||||| ||||||||||| | Sbjct 148730 ACACATCCGCGTGCCAGGGCTCCAAGTATACGGCAAATGCTCCAGGGCGTTTGTTTCCCC 148789 Query 63231 CCTGATC 63237 | ||||| Sbjct 148790 CTTGATC 148796 >seq20 Length=2175025 Score = 125 bits (138), Expect = 9e-24 Identities = 574/904 (63%), Gaps = 20/904 (2%) Strand=Plus/Plus Query 62992 TTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGA 63051 |||||||||||| || |||||| | | || ||||| || || | || ||||||| || Sbjct 1765521 TTCGAACTCGTCACCATAAACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGCGT 1765580 Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111 ||| |||| | || || || ||||| || | || || ||||| || || || Sbjct 1765581 CCAGGTGCCGTTCTGCTCGACACGCTTCATGAACAAGTCGGGGATCCACAGGGCGTAGAA 1765640 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 ||||| | | | ||||| || || ||||| | || |||||||||| | Sbjct 1765641 CAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACGAGAA 1765700 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 | ||| | ||||||||| |||| ||| ||||| | | |||| || || ||||| || || Sbjct 1765701 CACATCCGCATGCCACGGCTCCACGTAGATGGCGAAAGCTCCGGGACGCTTGTTGCCACC 1765760 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 || || | || | || ||||| || | || | | ||| || | || |||||| || Sbjct 1765761 TTGGTCAACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACAAGACCATTTGA 1765820 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63351 ||| || || || ||| ||| || || | ||||| ||| || ||||| Sbjct 1765821 TGTGCCGTTAGTGCCTCCGATGTACGAACCGGTAGCACGGATACGGTGAACGTTCAGACC 1765880 Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 63411 || || || || | || ||||| | ||||| || | || ||||| ||||| || Sbjct 1765881 GATGCCACCAGCGTTCTTGGAGATCATAGCGCAGGTCTTGAGGGTGTCATAAATGCCATC 1765940 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---AGT 63468 || || || ||| |||||| | || | ||| ||| | ||| | | || Sbjct 1765941 GATGCTGTCCTCCTTCATGTCGATGAGGA---AGCAAGAGGCGAGCTGAGGGTTCGGCGT 1765997 Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCA-TTTTTCAGAAAGTAGATTGT 63527 || || | || | ||||| || ||||| || || | || ||| | |||| |||| Sbjct 1765998 ACCAGCGCTGAAGAGCGTAGGGGAGGCGTGCGTGAAGTACTTGTTCGACATGTAG-TTGT 1766056 Query 63528 ACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACA 63587 | |||||||| || | || || ||| || || || || ||||||||||| | || Sbjct 1766057 ATGTCTCAATGGCGGCTTCGATGTCCTCGCCGTGGATACCGACAGCGACACGCATGATCA 1766116 Query 63588 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63647 | || || || | ||| | | |||| | || | | || ||||| || | | Sbjct 1766117 TCTGTTGTGGCCGTTCGGCCACCTTGCCATCAATCCTGAGCAGATAGGAACGCTCGAGGG 1766176 Query 63648 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 | || || || || || | ||| ||||| || || ||||| | || |||||||||| Sbjct 1766177 TCTTGAACCCGAAGTATTGGTAGTTGAAA--TCACGGTCGTAGACGATGGCCGAGTTGAG 1766234 Query 63706 TTTATCCTTATATTTGTTAACTACATCCATGGTAATACT----TGAAATAATAGGAAAAT 63761 | || ||| || | || ||| ||| || |||||| || || Sbjct 1766235 CTCTTCGCTATGCTTCATGACAGTATC----GTACGTCTCTTGTGAAATCATGGGGGCGG 1766290 Query 63762 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 63821 || ||| || || |||||||| | ||| | ||| || || || ||| | | Sbjct 1766291 CCTTATTATTCTTGGGGTTGACATAATAGAAAAGATCTGAAATGACGGCAGAGAATTGCT 1766350 Query 63822 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCG 63881 | || || | ||||| || || || || ||||| | ||| || || ||||| || || | Sbjct 1766351 TCTTGGTCTGCTTGTGGAGGTTGGAGACTGCTATACGAGCCGCGAGGATGGCGTAGTCTG 1766410 Query 63882 GATG 63885 |||| Sbjct 1766411 GATG 1766414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631841592000