Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq18 84.2 2e-11 seq16 84.2 2e-11 >seq18 Length=1930349 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| | || || || | ||||| |||| ||||||||| ||||| ||| Sbjct 1554063 TTCGTCAAGACCCTCACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACCATC 1554122 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || | ||| || ||| ||||| || || ||||| |||||||||||||| | Sbjct 1554123 GACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTG 1554182 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || |||||||| || || | || |||| || ||| || |||| ||||| || || || Sbjct 1554183 ATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGGACTCTGAGCGACTACAACATCCAGAA 1554241 >seq16 Length=1709166 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| ||| |||| || | |||||||| || || Sbjct 1053778 ATGCAGATCTTCGTCAAGACACTCACCGGCAAAACCATAACTTTGGAAGTGGAATCATCA 1053837 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | ||| | || | ||| || || || || || || |||||||| Sbjct 1053838 GACACAATCGACAACGTCAAGTCGAAGATTCAA-GATAAGGAGGGCATCCCTCCTGACCA 1053896 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || ||||| || || ||||| | || || | |||||||| Sbjct 1053897 GCAGCGCCTCATCTTCGCTGGCAAGCAGTTGGAAGACGGCCGAACGCTCTCGGATTACAA 1053956 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || || || | || || ||||| Sbjct 1053957 TATCCAGAAGGAGTCGACCTTGCACTTGGTGCT 1053989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327894376300