Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq16 111 1e-19 seq18 84.2 2e-11 >seq16 Length=1709166 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || | |||| ||| | ||| || |||| Sbjct 1053346 ACGGGAAAGACCATCACCCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGAGC 1053405 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| || || || || ||||| || ||||| || || Sbjct 1053406 AAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTTGCTGGAAAG 1053465 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | |||||| |||||| | ||||| ||||||||||| || || ||||| | ||| Sbjct 1053466 CAACTTGAGGATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACGCTCCAT 1053525 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || |||| |||| || ||| Sbjct 1053526 CTCGTGCTGCGTCTGCGTGGTGGT 1053549 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| ||||| || ||| | || Sbjct 1053550 ATGCAGATCTTCGTCAAGACGCTCACTGGAAAGACCATCACCCTTGAGGTTGAATCTTCC 1053609 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| ||||| || || || Sbjct 1053610 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 1053669 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | || || ||| || |||| || |||||| Sbjct 1053670 CAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACTCTCTCTGACTACAAC 1053729 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| |||||||| | ||| | ||| | || |||| || ||| Sbjct 1053730 ATCCAAAAGGAATCCACTTTGCATCTTGTTCTCCGTCTGCGTGGTGGT 1053777 >seq18 Length=1930349 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || ||||| | | ||| ||| | ||| | |||| Sbjct 1554078 ACGGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACCATCGACAACGTCAAGAGC 1554137 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || ||||| ||||| || |||||||| || Sbjct 1554138 AAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTGATCTTTGCCGGAAAG 1554197 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| | |||||| ||| || | ||| |||||||| || || Sbjct 1554198 CAGCTTGAGGATGGCCGGACTCTGAGCGACTACAACATCCAGAA 1554241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727897691300