Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq11 104 5e-17 seq18 87.8 4e-12 >seq11 Length=1047007 Score = 104 bits (114), Expect = 5e-17 Identities = 264/399 (66%), Gaps = 2/399 (1%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| || ||||| |||||| |||||||| || || | Sbjct 556321 TCGAAGAAGTTCGTCTTGCCTGATAGCGAGATGTTCTCCATAAAGTCGAACGGATTGCTA 556380 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| | | | ||| ||| ||||| | || || ||||| ||||| ||||| | Sbjct 556381 ACGTTGTAGTACCTTTGATTGCCGAGTGCCAGGAGGAGACGGTCAGCCACGAACTCAATG 556440 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741 ||||||| ||| || | ||||||||||||| || | | || ||| | || || | Sbjct 556441 TACTGTCTCATGAGATTCGAGTTCATGCCAAGCAGTGCTAC-AGGGAGAGCGTCCGTCAG 556499 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801 ||| || | || | | || || || | || | | ||| | | | | Sbjct 556500 GAACTCTTGCTCAATCGTGACGGCTTCAGTGATGATGTCTTGGACCAATTGCTGGTCGGG 556559 Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861 |||||||| || | ||| |||| | | |||| | ||||| |||||||| || Sbjct 556560 CTTGTTCTTGAGGTGCGAGAACAGCAAGCAGGCAAAGTCAGTGTGCATGCCCTCGTCACG 556619 Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921 ||||| ||||||||| | | || |||| ||| | ||||| ||| |||||||||| Sbjct 556620 CGAGATGAGCTCGTTGGAGAAAGTGAGACCAGCCATGAGGCCACGCTTCTTGAGCCAGAA 556679 Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 |||||| |||||| || ||| | | |||||| || Sbjct 556680 GATTGCTGCAAAGGAGCCGCTGAAGAAGATACCCTCTAC 556718 >seq18 Length=1930349 Score = 87.8 bits (96), Expect = 4e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || |||||||| || |||| |||| || || || || | ||||||||||| ||| Sbjct 1363115 GGCGAGGATCTTTGCAACTGCACTTTCAACCTGGCTTACGGCGCAAAGATTCTGCTGAAC 1363174 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 ||| ||| | ||||||||||| | || |||||||| |||| ||||| || | Sbjct 1363175 CAGACCAATCTCCGCCTCAAGCGTGGCCAGCGTTATGGTCTGCTCGGCCCCAACGGTTCT 1363234 Query 279465 GGTAAGAGCACTCTAATGCGCGCCAT 279490 || |||| |||||| ||||||||||| Sbjct 1363235 GGAAAGACCACTCTCATGCGCGCCAT 1363260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836536616820