Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq16 109 5e-19 seq18 89.7 4e-13 >seq16 Length=1709166 Score = 109 bits (120), Expect = 5e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | ||| | ||| || || || ||||||||||| ||| Sbjct 1053551 ATACCACCACGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCG 1053492 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| |||||||| || ||||| |||| |||||||| ||||| ||| Sbjct 1053491 GACAGGGTGCGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGA 1053432 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | || | |||||||| || || Sbjct 1053431 GGAATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCA 1053372 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || || | ||| | || || || |||| Sbjct 1053371 ACCTCAAGGGTGATGGTCTTTCCCGTCA 1053344 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | ||| | || ||||| ||||| |||||||| || Sbjct 1053779 ATACCACCACGCAGACGGAGAACAAGATGCAAAGTGGATTCCTTTTGGATGTTGTAGTCA 1053720 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||||| || || || ||||| |||| || ||||| ||||| ||| Sbjct 1053719 GAGAGAGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGA 1053660 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | || | |||||||| ||||| Sbjct 1053659 GGAATGCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGATTCA 1053600 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || || || || || || |||||||| Sbjct 1053599 ACCTCAAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 1053550 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | || || || || | || || || || || || |||||||| Sbjct 1054004 CCACCACGAAGACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCCGAG 1053945 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || ||||| | || || |||||| ||||||| ||||| ||||| ||||| Sbjct 1053944 AGCGTTCGGCCGTCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGG 1053885 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || || || |||||| || | | || | ||||| | ||||| || Sbjct 1053884 ATGCCCTCCTTATCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGATGATTCCACT 1053825 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||||||||||| || || || || || |||||||| Sbjct 1053824 TCCAAAGTTATGGTTTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 1053778 >seq18 Length=1930349 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 || || |||||||| ||||||| ||| || ||| ||||| || || || || |||| Sbjct 1554241 TTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATC 1554182 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 |||||||||||||| || |||||||| || ||||| ||||| || | | || Sbjct 1554181 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCG 1554122 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 | ||||||| | || || || || | ||| | || ||||| || || || || || || Sbjct 1554121 ATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAA 1554063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134297592240