Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq20 264 2e-65 seq11 239 8e-58 >seq20 Length=2175025 Score = 264 bits (292), Expect = 2e-65 Identities = 1145/1783 (64%), Gaps = 47/1783 (3%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| ||||| || ||||| || | || || |||||| ||||| ||| || || Sbjct 1764708 GTTGACCACTTGGAACTCGCCTGCCAAGACACGGCGCGAGTAGATGTTAGAAGTGTAAGG 1764767 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| || |||| ||||||| || ||||||||||| || | || Sbjct 1764768 CTCGAAGCACTCATTGAATCCCATGATCTGCGAGGTAGAAGCAGTCGGCATAGGGGCAAC 1764827 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGA-GCTCGTTCCAGTCCC 244268 || ||| ||| | || || ||| ||| | | | |||| | ||| |||| Sbjct 1764828 GAGAAGAGAGTTGCGGACACCATGCTGGGCGATCTTGTCCTTCAAGCTC-TGCCAATCCC 1764886 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 ||| || ||| | | ||| ||||||||||| |||||||| |||||| Sbjct 1764887 ACA-----GATCGGT----GGGAGTGACACCCCACATGTCGTACTGCAGCTCGCCCTTGG 1764937 Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCT 244388 ||||| |||||||| || || || ||| ||| || || | || | Sbjct 1764938 AAACGGGAGAACCCTCGTATGTTTCATAAGGCCCGAGCTGCTTTGCGAGGTCGCACGACG 1764997 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 || || || |||| ||||||||||||||||||| |||| | | ||| |||| | Sbjct 1764998 CGGTAAGTGCAGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTGGCGAGCCTCGG 1765057 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | || ||| || |||| || || |||| | || || || || | || || | | Sbjct 1765058 GGGAGTCGAAAGGCATGCGCAGAGCCAAGAAGGCATCCGCGAGACCATTGACACCCAGAC 1765117 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 ||||||| | || || |||||| | | || || ||||||||||| ||| || Sbjct 1765118 CGATGGGGCGATGACGGAAGTTGGACTTCTTTGCCTCAGGCACGGGGTAGTGGTTCAGGT 1765177 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 ||| | |||||| | ||| | || | || ||| ||| ||| || |||| Sbjct 1765178 TGATGATCTTGTTCAAGTTCTTGACGACAACCTGGGTGACCTCGTGGAGCTTCTTGAAGT 1765237 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688 | | || ||||||| || || | | | | | | ||||| | | Sbjct 1765238 CAAA------GGTCTCCTCGGTCATATCGA-CGT----AGGTGGGT-AGGGCCAGCGACG 1765285 Query 244689 CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGT 244748 ||| |||||| ||||| ||||| |||| ||||||| ||||||||| |||||||| | Sbjct 1765286 CCAAGTTGCACACGGCGACCTCATCCGGAGCAGTGTACTCGACAATCTCTGTGCAGAGAT 1765345 Query 244749 TACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGT 244808 | || |||| || |||| || || ||| |||| ||||| || ||||||| Sbjct 1765346 TGGAGCTGCGGATGACACCGAGGTTCTTCTGGTTGCTCTTGCGATTGCAAGCATCCTTGT 1765405 Query 244809 AGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCC 244868 ||||||||||||| ||||||||| ||| || |||||| | | ||| || | | Sbjct 1765406 AGAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTCT 1765465 Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928 ||| || || ||| | || || ||||||||| || || | |||| Sbjct 1765466 GAGCACGGATGGTGTCACGACCGCGACCTTCCTTCTCGTAGCGCTCATAGAGTTCTTCGA 1765525 Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACT 244988 ||||| || | || ||| | || || |||||| |||||||| || |||| Sbjct 1765526 ACTCGTCACCATAAACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGCGTCCAGG 1765585 Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048 |||| | || ||| | || |||||| | |||||||||||| ||||| | ||| || | Sbjct 1765586 TGCCGTTCTGCTCGACACGCTTCATGAACAAGTCGGGGATCCACAGGGCGTAGAACAGAT 1765645 Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGT 245108 | | | | ||| ||| ||| ||||||||| || || | || || || | Sbjct 1765646 CACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACGAGAACACAT 1765705 Query 245109 CGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGT 245168 | | ||||| ||||||| ||||| |||| || ||||| ||||||||||| || |||| Sbjct 1765706 CCGCATGCCACGGCTCCACGTAGATGGCGAAAGCTCCGGGACGCTTGTTGCCACCTTGGT 1765765 Query 245169 CCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGG 245227 || ||| || | |||||||| ||| || | ||||| | || || || | Sbjct 1765766 -CAACATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACAAGACCATTTGATGTG 1765824 Query 245228 CCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGT 245287 ||||| ||||| |||||| | || | | | || | | | || || | Sbjct 1765825 CCGTTAGTGCCTCCGATGTACGAACCGGTAGCACGGATACGGTGAACGTTCAGACCGATG 1765884 Query 245288 CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATG 245347 || || |||| ||||||||| | |||||| |||||| |||||| ||||| || ||| Sbjct 1765885 CCACCAGCGTTCTTGGAGATCATAGCGCAGGTCTTGAGGGTGTCATAAATGCCATCGATG 1765944 Query 245348 CTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAG 245407 |||||| |||||||| || || ||||| |||| ||||| || || || | | | | Sbjct 1765945 CTGTCCTCCTTCATGTCGATGAGGAAGCAAGAGGCGAGCTGAGGGTTCGGCGTACCAGCG 1766004 Query 245408 TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGG 245467 |||| || || ||| |||||| || ||||| | |||| | | | ||| |||| Sbjct 1766005 CTGAAGAGCGTAGGGGAGGCGTGCGTGAAGTACTTGTTCGACATGTAGTTGTATGTCTCA 1766064 Query 245468 AGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGG 245527 | || ||||||| ||||||||||| | ||| | ||||| | || || Sbjct 1766065 ATGGCGGCTTCGATGTCCTCGCCGTGGATACCGACAGCGACACGCATGATCATCTGTTGT 1766124 Query 245528 GGCGTCTCGATGGGTC-CCTCG-GGTC--CCTTGAGCATGTAGGAGCGCTCGAGCGTCTT 245583 ||| || | || | ||| | || | |||||| ||||| |||||||| ||||| Sbjct 1766125 GGC----CGTTCGGCCACCTTGCCATCAATCCTGAGCAGATAGGAACGCTCGAGGGTCTT 1766180 Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAG-TCTCT 245642 |||||| ||||| |||| || || || || || ||| | || ||| ||| | Sbjct 1766181 GAACCCGAAGTATTGGTAGTTGAAATCACGGTCGTAGACGATGGCCGAGTTGAGCTCT-T 1766239 Query 245643 CGGCGTGCTTC-TGACTGACCTCGTAAAACTTTTGCGCTATGA--GGGGAGCCCTGAGCC 245699 || |||||| |||| | ||||| || ||| | || | |||| | ||| | Sbjct 1766240 CGCTATGCTTCATGACAG-TATCGTACGTCTCTTGTGAAATCATGGGGGCGGCCTTA--T 1766296 Query 245700 CGGTGTCCGGATTGACGTTGAACCAGAGCCTCTTGCA-CACCTCCGAGAACTTGGGGC-T 245757 | | || ||||| | | | || ||| | || | ||||| ||| | | Sbjct 1766297 TATTCTTGGGGTTGACATAATAGAAAAG-ATCTGAAATGACGGCAGAGAA-TTGCTTCTT 1766354 Query 245758 GGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCAACTTGCTGTAGTCGGGGTG 245817 ||| |||| || ||||||| ||||||||| || ||||| | || |||||| || || Sbjct 1766355 GGTCTGCTTGTGGAGGTTGGAGACTGCTATACGAGCCGCGAGGATGGCGTAGTCTGGATG 1766414 Query 245818 AGTGGTGGTCATGTTGGAGGCCGTGTGGGCCAGC-AGCTCGTC 245859 ||||||||||| | || ||| || | || |||| || ||||| Sbjct 1766415 GGTGGTGGTCATATAGGCGGCGGTCTCGG-CAGCGAGGTCGTC 1766456 >seq11 Length=1047007 Score = 239 bits (264), Expect = 8e-58 Identities = 368/517 (71%), Gaps = 11/517 (2%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 || |||||||| |||||||| |||||||| ||| |||||| | | | || | ||| Sbjct 556808 CCATGCATCAAAAAGAAGGCAGACTGGGCTCTCCGATGGATCTCGGATGACAACTCCACG 556749 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 || | | || | || || ||||||| ||||| ||||||||| ||| |||| Sbjct 556748 TTTGCTTGCCGATTGATTGCATTCGCCGCCGTAGAGGGTATCTTCTTCAGCGGCTCCTTT 556689 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || | ||||||||||||||| || || || ||| | || ||||| ||||| ||||| Sbjct 556688 GCAGCAATCTTCTGGCTCAAGAAGCGTGGCCTC-ATGGCTGGTCTCACTTTCTCCAACGA 556630 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 |||||| | |||||||| |||| | |||||||||||| | ||||||||| || Sbjct 556629 GCTCATCTCGCGTGACGAGGGCATGCACACTGACTTTGCCTGCTTGCTGTTCTCG---CA 556573 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 ||||| | |||||||| || | ||||| | ||||||||| || ||||| ||| Sbjct 556572 CCTCAAGAACAAGCCCGACCAGCAATTGGTCCAAGACATCATCACTGAAGCCGTCACGAT 556513 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 ||| | |||||||| ||| | | || || || | ||| | ||||||||| | || Sbjct 556512 TGAGCAAGAGTTCCTGACGGACGCTCTCCCTGTAGCACTGCTTGGCATGAACTCGAATCT 556453 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCC 43050 |||| | ||||||| ||| ||| || |||| |||||| || || || ||| Sbjct 556452 CATGAGACAGTACATTGAGTTCGTGGCTGACCGTCTCCTCCTGGCACTCGGCAATCA-AA 556394 Query 43051 GCCTCTACAAC--ACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108 | ||||||| || | || |||||||||||||||||||||||| | ||||| Sbjct 556393 GGTACTACAACGTTAGCAAT--CCGTTCGACTTTATGGAGAACATCTCGCTATCAGGCAA 556336 Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||| ||||| |||||||||||||| | ||||||||| Sbjct 556335 GACGAACTTCTTCGAGAAGCGCGTGGGTGACTACCAG 556299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338963915200