Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq11 98.7 2e-15 >seq11 Length=1047007 Score = 98.7 bits (108), Expect = 2e-15 Identities = 254/377 (67%), Gaps = 10/377 (3%) Strand=Plus/Minus Query 243382 ATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAG 243441 ||| |||| ||| | | || |||||| ||||| || ||||||||| | ||| | Sbjct 556655 ATGGCTGGTCTCACTTTCTCCAACGAGCTCATCTCGCGTGACGAGGGCATGCACACTGAC 556596 Query 243442 TTCGGTGAGCTTA-TGTATTCAAAGCTCCAGAACAAGCT--ACCATTCGAAACGGTCAAA 243498 || | |||| ||| || | ||| ||||||||| |||| || |||| || Sbjct 556595 TTTGCCT-GCTTGCTGTTCTCGCACCTCAAGAACAAGCCCGACCAGC--AATTGGTCCAA 556539 Query 243499 CAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGC 243558 | |||||||| ||||| || | || | || ||| | |||||| | || || Sbjct 556538 GACATCATCACTGAAGCCGTCACGATTGAGCAAGAGTTCCTGACGGACGCTCTCCC-TGT 556480 Query 243559 CGG-CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCG 243617 | || ||||||||||||| | |||||| |||||||||| || ||||| || ||||| Sbjct 556479 AGCACTGCTTGGCATGAACTCGAATCTCATGAGACAGTACATTGAGTTCGTGGCTGACCG 556420 Query 243618 CATTTTCATCGCGCTTGGTTATGAGAAAGT-GTACAACTCCAAGAACCCCTTTGCCTTTA 243676 | || | || || || || | || || |||||| | || || || | ||||| Sbjct 556419 TCTCCTCCTGGCACTCGGCAATCA-AAGGTACTACAACGTTAGCAATCCGTTCGACTTTA 556361 Query 243677 TGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATC 243736 ||||| ||| ||||| ||| || || ||||||||||| ||||| || |||| || | Sbjct 556360 TGGAGAACATCTCGCTATCAGGCAAGACGAACTTCTTCGAGAAGCGCGTGGGTGACTACC 556301 Query 243737 AACGCCCTGGTGTGATG 243753 | ||||||| ||| Sbjct 556300 AGAAGGCTGGTGTCATG 556284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879717387000