Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq16 127 2e-24 seq18 109 6e-19 seq15 84.2 2e-11 >seq16 Length=1709166 Score = 127 bits (140), Expect = 2e-24 Identities = 162/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| |||||| ||||| || |||||| || ||||||||||| | || || || | Sbjct 1053993 ACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCCGAGAGCGTTCGGCC 1053934 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || | |||||| |||||||| ||||| ||||||||||| | || | || |||||| Sbjct 1053933 GTCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTT 1053874 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170 | | ||| | || | |||| ||| | | | ||||| |||||||| || | || Sbjct 1053873 AT-CTTGAATCTTCGACTTGA-CGTTGTCGATTGTGTCTGATGATTCCACTTCCAAAGTT 1053816 Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||||| || || ||||| || ||||| ||||| Sbjct 1053815 ATGGTTTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 1053778 Score = 123 bits (136), Expect = 3e-23 Identities = 154/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 |||||| ||| |||||||| || ||||| |||| ||||| || |||| || ||||| Sbjct 1053753 ATGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCGTCTTCGAGCTG 1053694 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| ||||| || || || ||||||||||| | || | || |||||||||| ||| | | Sbjct 1053693 CTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC-TGAATCT 1053635 Query 42125 TTGT-TTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCC 42182 | | |||| ||| | | | |||||| ||||| || || | |||||||| || || Sbjct 1053634 TGCTCTTGA-CGTTGTCGATGGTGTCGGAAGATTCAACCTCAAGGGTGATGGTCTTTCCA 1053576 Query 42183 GTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||||||| || ||||| ||||| Sbjct 1053575 GTGAGCGTCTTGACGAAGATCTGCAT 1053550 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||| | ||| | ||| |||||| ||||| ||||| || | ||| || || | Sbjct 1053537 ACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACC 1053478 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || || ||||| ||||| || || || ||||||||||| | || | || |||||| Sbjct 1053477 ATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTT 1053418 Query 42113 GTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| | || | |||| | | | |||||| || || || || | |||| Sbjct 1053417 GTCC-TGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGGGTGA 1053359 Query 42172 TGGTTTTGCCCGT 42184 |||| || ||||| Sbjct 1053358 TGGTCTTTCCCGT 1053346 >seq18 Length=1930349 Score = 109 bits (120), Expect = 6e-19 Identities = 143/194 (74%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 42009 AATGT-GCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTT 42067 ||||| ||| |||| || || ||||| || ||||||||| | || || |||||||| Sbjct 1554254 AATGTTGCTGACCTTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTT 1554195 Query 42068 ACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG 42127 || || || || || ||||| ||||| | || | || |||||||||| ||| || Sbjct 1554194 TCCGGCAAAGATCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGCT 1554135 Query 42128 TTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTA 42186 |||| ||| | | | ||||||||||| ||||| |||| ||||| || |||||||| | Sbjct 1554134 CTTGA-CGTTGTCGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGA 1554076 Query 42187 GCGTCTTTACAAAG 42200 | ||||| || ||| Sbjct 1554075 GGGTCTTGACGAAG 1554062 >seq15 Length=1704560 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | ||| || || |||| || |||||||| |||||||| Sbjct 828592 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCGAA 828651 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || || ||||||||||||| || | || ||||||||| Sbjct 828652 GATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 828690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212664196800