Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq16 107 2e-18 seq15 96.9 3e-15 >seq16 Length=1709166 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || || |||||||| | || || || ||||||| | ||||||||| Sbjct 1053974 GTCGACTCCTTCTGGATATTGTAATCCGAGAGCGTTCGGCCGTCTTCCAACTGCTTGCCA 1053915 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| ||||| || || || || ||||| || || ||| Sbjct 1053914 GCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCTTGAATCTTCGACTTG 1053855 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||| || | |||||||| | ||||| ||| |||||||| | || Sbjct 1053854 ACGTTGTCGATTGTGTCTGATGATTCCACTTCCAAAGTTATGGTTTTGCCGGTGAGTGTC 1053795 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 1053794 TTGACGAAGATCTGCAT 1053778 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| ||||| | ||| || || || ||||||||||| || | Sbjct 1053549 ACCACCACGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGA 1053490 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || ||||| ||||| || ||| | || || ||||||||||| ||||| Sbjct 1053489 CAGGGTGCGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 1053430 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| || || || || || || || Sbjct 1053429 AATGCCCTCCTTGTCCTGAATCTT 1053406 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || ||||| | || ||||| ||||| |||||||| || | Sbjct 1053777 ACCACCACGCAGACGGAGAACAAGATGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGA 1053718 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || ||||||| |||||||| || ||| | || || ||||||||||| ||||| Sbjct 1053717 GAGAGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGG 1053658 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| || || || || || || || Sbjct 1053657 AATGCCCTCCTTGTCCTGAATCTT 1053634 >seq15 Length=1704560 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | ||||| || |||| ||||| || || || |||||||| || | Sbjct 828556 ACCGCCACGGAGACGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 828615 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| ||||||| ||||||||||| || | || || |||||||||||||| || Sbjct 828616 CAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGG 828675 Query 64336 AATTCCTTCTTTTTCT 64351 ||| || || || ||| Sbjct 828676 AATGCCCTCCTTGTCT 828691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644675088800