Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq16 113 4e-20 seq18 89.7 5e-13 >seq16 Length=1709166 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||| | ||| | ||| ||||| || ||||| ||||| ||| | Sbjct 1053548 CCACCACGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAC 1053489 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || || || |||||||| |||||| |||||||| || ||||| Sbjct 1053488 AGGGTGCGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 1053429 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||||| | |||| |||||| | | ||| || Sbjct 1053428 ATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCAACC 1053369 Query 127067 TCGACGGTCACCGTTTTGCCGGTCA 127091 || | ||| | || || || |||| Sbjct 1053368 TCAAGGGTGATGGTCTTTCCCGTCA 1053344 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||||| || | || ||||| || || ||||||||||| Sbjct 1054004 CCACCACGAAGACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCCGAG 1053945 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || || || | ||| || |||||| |||| | |||||||| || ||||| Sbjct 1053944 AGCGTTCGGCCGTCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGG 1053885 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||| || || ||| ||||| ||||| ||| ||||| | || || Sbjct 1053884 ATGCCCTCCTTATCTTGAATCTTCGACTTGACGTTGT-CGATTGTGTCTGATGATTCCAC 1053826 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||||||||| || || || || || |||||||| Sbjct 1053825 TTCCAAAGTTATGGTTTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 1053778 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| |||||||| |||||| |||||||| || ||||| |||||||||||| Sbjct 1053704 TCTTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTG 1053645 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| || || ||||| |||| |||| |||||| | | || || || | ||| | Sbjct 1053644 TCCTGAATCTTGCTCTTGACGTTG-TCGATGGTGTCGGAAGATTCAACCTCAAGGGTGAT 1053586 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || || || || |||||||| Sbjct 1053585 GGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 1053550 >seq18 Length=1930349 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || || || ||| || ||||| ||||| || ||||| Sbjct 1554241 TTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATC 1554182 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | ||||| || || || || ||||||||||||||| ||| || ||||| |||| || Sbjct 1554181 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TC 1554123 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | ||| || |||| ||| | || ||||| || || || || || Sbjct 1554122 GATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGAC--G 1554065 Query 127105 AATCTGCATGGCTTATT 127121 || |||||| ||||| Sbjct 1554064 AAGCTGCATCATTTATT 1554048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500681124800