Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.11243_20[genbank_20GCA_5F000836255.1_202015-02-02] 20 sequences; 21,719,822 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq16 134 3e-26 seq18 111 4e-19 seq15 96.9 8e-15 >seq16 Length=1709166 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || | ||| || |||||||||| ||||||||||| | ||| | || ||| Sbjct 1053761 AGAACAAGATGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCGGCCGTCT 1053702 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || ||||| || ||||||||||| ||| ||| || || ||| Sbjct 1053701 TCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 1053642 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| |||||| | | ||| || || | ||||| ||| Sbjct 1053641 TGAATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGATTCAACCTCAAGGGTGATGGTC 1053582 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 1053581 TTTCCAGTGAGCGTCTTGACGAAGATCTG 1053553 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||| || | ||| | ||||||||||| |||| ||||| || | | || Sbjct 1053998 CGAAGACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATATTGTAATCCGAGAGCGTT 1053939 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| |||||| || ||||||||||| ||||||||||| ||| || || Sbjct 1053938 CGGCCGTCTTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCC 1053879 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| ||| |||| ||||||| || ||| || ||||| Sbjct 1053878 TCCTTATCTTGAATCTTCGACTTGACGTTGTCGATTGTGTCTGATGATTCCACTTCCAAA 1053819 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || || || || Sbjct 1053818 GTTATGGTTTTGCCGGTGAGTGTCTTGACGAAGATCTG 1053781 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || || ||||| || |||||||| || | ||||||||| | || || Sbjct 1053542 CGCAGACGCAGCACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTG 1053483 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || |||||||| || ||||| |||||||||||||| ||| ||| || Sbjct 1053482 CGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCC 1053423 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| |||||| | | || || || | Sbjct 1053422 TCCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGG 1053363 Query 199589 GTGATCGTCTTACCCGT 199605 ||||| ||||| ||||| Sbjct 1053362 GTGATGGTCTTTCCCGT 1053346 >seq18 Length=1930349 Score = 111 bits (122), Expect = 4e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| || ||||| ||||| || |||||||||||||| |||| Sbjct 1554243 CCTTCTGGATGTTGTAGTCGCTCAGAGTCCGGCCATCCTCAAGCTGCTTTCCGGCAAAGA 1554184 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | |||||||| ||||| || ||| || || ||||| ||||| ||| ||| | Sbjct 1554183 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGT 1554124 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||| |||||||| || || || | Sbjct 1554123 CGATGGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGA 1554064 Query 199620 A 199620 | Sbjct 1554063 A 1554063 >seq15 Length=1704560 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| | || || | || ||| Sbjct 828572 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 828631 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| || |||||||| || ||||||||||| || Sbjct 828632 TCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGG 828672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921297901340